Discovery and validation of a novel blood-based molecular biomarker of rejection following liver transplantation.

biomarker clinical research/practice clinical trial genomics immunobiology immunosuppression/immune modulation liver allograft function/dysfunction liver transplantation/hepatology rejection translational research/science

Journal

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons
ISSN: 1600-6143
Titre abrégé: Am J Transplant
Pays: United States
ID NLM: 100968638

Informations de publication

Date de publication:
08 2020
Historique:
received: 25 09 2019
revised: 28 02 2020
accepted: 13 04 2020
pubmed: 2 5 2020
medline: 22 6 2021
entrez: 2 5 2020
Statut: ppublish

Résumé

Noninvasive biomarker profiles of acute rejection (AR) could affect the management of liver transplant (LT) recipients. Peripheral blood was collected following LT for discovery (Northwestern University [NU]) and validation (National Institute of Allergy and Infectious Diseases Clinical Trials in Organ Transplantation [CTOT]-14 study). Blood gene profiling was paired with biopsies showing AR or ADNR (acute dysfunction no rejection) as well as stable graft function samples (Transplant eXcellent-TX). CTOT-14 subjects had serial collections prior to AR, ADNR, TX, and after AR treatment. NU cohort gene expression (46 AR, 45 TX) was analyzed using random forest models to generate a classifier training set (36 gene probe) distinguishing AR vs TX (area under the curve 0.92). The algorithm and threshold were locked and tested on the CTOT-14 validation cohort (14 AR, 50 TX), yielding an accuracy of 0.77, sensitivity 0.57, specificity 0.82, positive predictive value (PPV) 0.47, and negative predictive value (NPV) 0.87 for AR vs TX. The probability score line slopes were positive preceding AR, and negative preceding TX and non-AR (TX + ADNR) (P ≤ .001) and following AR treatment. In conclusion, we have developed a blood biomarker diagnostic for AR that can be detected prior to AR-associated graft injury as well a normal graft function (non-AR). Further studies are needed to evaluate its utility in precision-guided immunosuppression optimization following LT.

Identifiants

pubmed: 32356368
doi: 10.1111/ajt.15953
pmc: PMC7496674
pii: S1600-6135(22)22521-0
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

2173-2183

Subventions

Organisme : NIAID NIH HHS
ID : UM2 AI117870
Pays : United States
Organisme : National Institute of Allergy and Infectious Diseases
ID : U01AI084146
Pays : International

Informations de copyright

© 2020 The Authors. American Journal of Transplantation published by Wiley Periodicals LLC on behalf of The American Society of Transplantation and the American Society of Transplant Surgeons.

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Auteurs

Josh Levitsky (J)

Comprehensive Transplant Center, Northwestern University Feinberg School of Medicine, Chicago, Illinois.
Division of Gastroenterology and Hepatology, Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois.

Sumeet K Asrani (SK)

Annette C. and Harold C. Simmons Transplant Institute, Baylor University Medical Center, Dallas, Texas.

Thomas Schiano (T)

Mount Sinai Hospital, New York, New York.

Adyr Moss (A)

Mayo Clinic Arizona, Phoenix, Arizona.

Kenneth Chavin (K)

Case Western University, Cleveland, Ohio.

Charles Miller (C)

Cleveland Clinic Foundation, Cleveland, Ohio.

Kexin Guo (K)

Comprehensive Transplant Center, Northwestern University Feinberg School of Medicine, Chicago, Illinois.
Biostatistics Collaboration Center, Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois.

Lihui Zhao (L)

Comprehensive Transplant Center, Northwestern University Feinberg School of Medicine, Chicago, Illinois.
Biostatistics Collaboration Center, Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois.

Manoj Kandpal (M)

Comprehensive Transplant Center, Northwestern University Feinberg School of Medicine, Chicago, Illinois.
Biostatistics Collaboration Center, Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois.

Nancy Bridges (N)

Division of Allergy, Immunology, and Transplantation, National Institute of Allergy and Infectious Diseases, Bethesda, Maryland.

Merideth Brown (M)

Division of Allergy, Immunology, and Transplantation, National Institute of Allergy and Infectious Diseases, Bethesda, Maryland.

Brian Armstrong (B)

Rho Federal Systems Division, Durham, North Carolina.

Sunil Kurian (S)

The Scripps Research Institute, La Jolla, California.

Anthony J Demetris (AJ)

University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.

Michael Abecassis (M)

University of Arizona College of Medicine, Tucson, Arizona.

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