Systemic short chain fatty acids limit antitumor effect of CTLA-4 blockade in hosts with cancer.
Animals
B7-1 Antigen
/ metabolism
B7-2 Antigen
/ metabolism
Biomarkers, Tumor
/ blood
Butyrates
/ blood
CTLA-4 Antigen
/ antagonists & inhibitors
Dendritic Cells
/ metabolism
Fatty Acids, Volatile
/ blood
Gastrointestinal Microbiome
/ drug effects
Humans
Ipilimumab
/ pharmacology
Mice
Mice, Inbred BALB C
Neoplasms
/ blood
Propionates
/ blood
RNA, Ribosomal, 16S
/ metabolism
T-Lymphocytes
/ drug effects
T-Lymphocytes, Regulatory
/ metabolism
Journal
Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555
Informations de publication
Date de publication:
01 05 2020
01 05 2020
Historique:
received:
04
04
2019
accepted:
08
04
2020
entrez:
3
5
2020
pubmed:
3
5
2020
medline:
4
8
2020
Statut:
epublish
Résumé
Gut microbiota composition influences the clinical benefit of immune checkpoints in patients with advanced cancer but mechanisms underlying this relationship remain unclear. Molecular mechanism whereby gut microbiota influences immune responses is mainly assigned to gut microbial metabolites. Short-chain fatty acids (SCFA) are produced in large amounts in the colon through bacterial fermentation of dietary fiber. We evaluate in mice and in patients treated with anti-CTLA-4 blocking mAbs whether SCFA levels is related to clinical outcome. High blood butyrate and propionate levels are associated with resistance to CTLA-4 blockade and higher proportion of Treg cells. In mice, butyrate restrains anti-CTLA-4-induced up-regulation of CD80/CD86 on dendritic cells and ICOS on T cells, accumulation of tumor-specific T cells and memory T cells. In patients, high blood butyrate levels moderate ipilimumab-induced accumulation of memory and ICOS + CD4 + T cells and IL-2 impregnation. Altogether, these results suggest that SCFA limits anti-CTLA-4 activity.
Identifiants
pubmed: 32358520
doi: 10.1038/s41467-020-16079-x
pii: 10.1038/s41467-020-16079-x
pmc: PMC7195489
doi:
Substances chimiques
B7-1 Antigen
0
B7-2 Antigen
0
Biomarkers, Tumor
0
Butyrates
0
CTLA-4 Antigen
0
Fatty Acids, Volatile
0
Ipilimumab
0
Propionates
0
RNA, Ribosomal, 16S
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
2168Références
Robert, C. et al. Ipilimumab plus dacarbazine for previously untreated metastatic melanoma. N. Engl. J. Med. 364, 2517–2526 (2011).
pubmed: 21639810
doi: 10.1056/NEJMoa1104621
Hodi, F. S. et al. Improved survival with ipilimumab in patients with metastatic melanoma. N. Engl. J. Med. 363, 711–723 (2010).
pubmed: 20525992
pmcid: 3549297
doi: 10.1056/NEJMoa1003466
Robert, C. et al. Pembrolizumab versus ipilimumab in advanced melanoma. N. Engl. J. Med. 372, 2521–2532 (2015).
pubmed: 25891173
doi: 10.1056/NEJMoa1503093
Larkin, J. et al. Combined nivolumab and ipilimumab or monotherapy in untreated melanoma. N. Engl. J. Med. 373, 23–34 (2015).
pubmed: 26027431
pmcid: 5698905
doi: 10.1056/NEJMoa1504030
Vétizou, M. et al. Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota. Science 350, 1079–1084 (2015).
pubmed: 26541610
pmcid: 26541610
doi: 10.1126/science.aad1329
Chaput, N. et al. Baseline gut microbiota predicts clinical response and colitis in metastatic melanoma patients treated with ipilimumab. Ann. Oncol. https://doi.org/10.1093/annonc/mdx108 (2017).
Gopalakrishnan, V. et al. Gut microbiome modulates response to anti-PD-1 immunotherapy in melanoma patients. Science https://doi.org/10.1126/science.aan4236 (2017).
Dubin, K. et al. Intestinal microbiome analyses identify melanoma patients at risk for checkpoint-blockade-induced colitis. Nat. Commun. 7, 10391 (2016).
pubmed: 26837003
pmcid: 4740747
doi: 10.1038/ncomms10391
Frankel, A. E. et al. Metagenomic shotgun sequencing and unbiased metabolomic profiling identify specific human gut microbiota and metabolites associated with immune checkpoint therapy efficacy in melanoma patients. Neoplasia N. Y. N. 19, 848–855 (2017).
doi: 10.1016/j.neo.2017.08.004
Sivan, A. et al. Commensal Bifidobacterium promotes antitumor immunity and facilitates anti-PD-L1 efficacy. Science 350, 1084–1089 (2015).
pubmed: 4873287
pmcid: 4873287
doi: 10.1126/science.aac4255
Cerf-Bensussan, N. & Gaboriau-Routhiau, V. The immune system and the gut microbiota: friends or foes? Nat. Rev. Immunol. 10, 735–744 (2010).
pubmed: 20865020
doi: 10.1038/nri2850
Donohoe, D. R. et al. The microbiome and butyrate regulate energy metabolism and autophagy in the mammalian colon. Cell Metab. 13, 517–526 (2011).
pubmed: 21531334
pmcid: 3099420
doi: 10.1016/j.cmet.2011.02.018
Donohoe, D. R., Wali, A., Brylawski, B. P. & Bultman, S. J. Microbial regulation of glucose metabolism and cell-cycle progression in mammalian colonocytes. PLoS ONE 7, e46589 (2012).
pubmed: 23029553
pmcid: 3460890
doi: 10.1371/journal.pone.0046589
Meijer, K., de Vos, P. & Priebe, M. G. Butyrate and other short-chain fatty acids as modulators of immunity: what relevance for health? Curr. Opin. Clin. Nutr. Metab. Care 13, 715–721 (2010).
pubmed: 20823773
doi: 10.1097/MCO.0b013e32833eebe5
Thorburn, A. N., Macia, L. & Mackay, C. R. Diet, metabolites, and ‘western-lifestyle’ inflammatory diseases. Immunity 40, 833–842 (2014).
pubmed: 24950203
doi: 10.1016/j.immuni.2014.05.014
Maslowski, K. M. & Mackay, C. R. Diet, gut microbiota and immune responses. Nat. Immunol. 12, 5–9 (2011).
pubmed: 21169997
doi: 10.1038/ni0111-5
Bloemen, J. G. et al. Short chain fatty acids exchange across the gut and liver in humans measured at surgery. Clin. Nutr. Edinb. Scotl. 28, 657–661 (2009).
doi: 10.1016/j.clnu.2009.05.011
Blacher, E., Levy, M., Tatirovsky, E. & Elinav, E. Microbiome-modulated metabolites at the interface of host immunity. J. Immunol. Baltim. Md 1950 198, 572–580 (2017).
Smith, P. M. et al. The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science 341, 569–573 (2013).
pubmed: 23828891
doi: 10.1126/science.1241165
Arpaia, N. et al. Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation. Nature 504, 451–455 (2013).
pubmed: 24226773
pmcid: 3869884
doi: 10.1038/nature12726
Canfora, E. E., Jocken, J. W. & Blaak, E. E. Short-chain fatty acids in control of body weight and insulin sensitivity. Nat. Rev. Endocrinol. 11, 577–591 (2015).
pubmed: 26260141
doi: 10.1038/nrendo.2015.128
Mariño, E. et al. Gut microbial metabolites limit the frequency of autoimmune T cells and protect against type 1 diabetes. Nat. Immunol. 18, 552–562 (2017).
pubmed: 28346408
doi: 10.1038/ni.3713
Liu, L. et al. Butyrate interferes with the differentiation and function of human monocyte-derived dendritic cells. Cell. Immunol. 277, 66–73 (2012).
pubmed: 22698927
doi: 10.1016/j.cellimm.2012.05.011
Säemann, M. D. et al. Bacterial metabolite interference with maturation of human monocyte-derived dendritic cells. J. Leukoc. Biol. 71, 238–246 (2002).
pubmed: 11818444
Magner, W. J. et al. Activation of MHC class I, II, and CD40 gene expression by histone deacetylase inhibitors. J. Immunol. Baltim. Md 1950 165, 7017–7024 (2000).
Comalada, M. et al. The effects of short-chain fatty acids on colon epithelial proliferation and survival depend on the cellular phenotype. J. Cancer Res. Clin. Oncol. 132, 487–497 (2006).
pubmed: 16788843
doi: 10.1007/s00432-006-0092-x
Felix, J. et al. Ipilimumab reshapes T cell memory subsets in melanoma patients with clinical response. Oncoimmunology 5, 1136045 (2016).
Fu, T., He, Q. & Sharma, P. The ICOS/ICOSL pathway is required for optimal antitumor responses mediated by anti-CTLA-4 therapy. Cancer Res. 71, 5445–5454 (2011).
pubmed: 21708958
doi: 10.1158/0008-5472.CAN-11-1138
Segain, J. P. et al. Butyrate inhibits inflammatory responses through NFkappaB inhibition: implications for Crohn’s disease. Gut 47, 397–403 (2000).
pubmed: 10940278
pmcid: 1728045
doi: 10.1136/gut.47.3.397
Tedelind, S., Westberg, F., Kjerrulf, M. & Vidal, A. Anti-inflammatory properties of the short-chain fatty acids acetate and propionate: a study with relevance to inflammatory bowel disease. World J. Gastroenterol. 13, 2826–2832 (2007).
pubmed: 17569118
pmcid: 4395634
doi: 10.3748/wjg.v13.i20.2826
Wegh, Ca. M. et al. Intestinal permeability measured by urinary sucrose excretion correlates with serum zonulin and faecal calprotectin concentrations in UC patients in remission. J. Nutr. Metab. 2019, 2472754 (2019).
pubmed: 31061734
pmcid: 6466955
doi: 10.1155/2019/2472754
Sturgeon, C., Lan, J. & Fasano, A. Zonulin transgenic mice show altered gut permeability and increased morbidity/mortality in the DSS colitis model. Ann. N. Y. Acad. Sci. 1397, 130–142 (2017).
pubmed: 28423466
pmcid: 5479715
doi: 10.1111/nyas.13343
Hannani, D. et al. Erratum: anticancer immunotherapy by CTLA-4 blockade: obligatory contribution of IL-2 receptors and negative prognostic impact of soluble CD25. Cell Res. 25, 399–400 (2015).
pubmed: 25732764
pmcid: 4349252
doi: 10.1038/cr.2015.28
Rudd, C. E., Taylor, A. & Schneider, H. CD28 and CTLA-4 coreceptor expression and signal transduction. Immunol. Rev. 229, 12–26 (2009).
pubmed: 19426212
pmcid: 4186963
doi: 10.1111/j.1600-065X.2009.00770.x
Qureshi, O. S. et al. Trans-endocytosis of CD80 and CD86: a molecular basis for the cell-extrinsic function of CTLA-4. Science 332, 600–603 (2011).
pubmed: 21474713
pmcid: 3198051
doi: 10.1126/science.1202947
Bachmann, M. F., Köhler, G., Ecabert, B., Mak, T. W. & Kopf, M. Cutting edge: lymphoproliferative disease in the absence of CTLA-4 is not T cell autonomous. J. Immunol. Baltim. Md 1950 163, 1128–1131 (1999).
Jackson, S. K., DeLoose, A. & Gilbert, K. M. The ability of antigen, but not interleukin-2, to promote n-butyrate-induced T helper 1 cell anergy is associated with increased expression and altered association patterns of cyclin-dependent kinase inhibitors. Immunology 106, 486–495 (2002).
pubmed: 12153511
pmcid: 1782758
doi: 10.1046/j.1365-2567.2002.01457.x
Qiang, Y. et al. Butyrate and retinoic acid synergistically imprint mucosal-like dendritic cell development from bone marrow cells. Clin. Exp. Immunol. https://doi.org/10.1111/cei.12990 (2017).
Furusawa, Y. et al. Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells. Nature 504, 446–450 (2013).
doi: 10.1038/nature12721
pubmed: 24226770
Duncan, S. H. et al. Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrate-producing bacteria in feces. Appl. Environ. Microbiol. 73, 1073–1078 (2007).
pubmed: 17189447
doi: 10.1128/AEM.02340-06
Cummings, J. H., Pomare, E. W., Branch, W. J., Naylor, C. P. & Macfarlane, G. T. Short chain fatty acids in human large intestine, portal, hepatic and venous blood. Gut 28, 1221–1227 (1987).
pubmed: 3678950
pmcid: 1433442
doi: 10.1136/gut.28.10.1221
Scott, K. P., Martin, J. C., Campbell, G., Mayer, C.-D. & Flint, H. J. Whole-genome transcription profiling reveals genes up-regulated by growth on fucose in the human gut bacterium ‘Roseburia inulinivorans’. J. Bacteriol. 188, 4340–4349 (2006).
pubmed: 16740940
pmcid: 1482943
doi: 10.1128/JB.00137-06
Louis, P., Young, P., Holtrop, G. & Flint, H. J. Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environ. Microbiol 12, 304–314 (2010).
pubmed: 19807780
doi: 10.1111/j.1462-2920.2009.02066.x
Reichardt, N. et al. Phylogenetic distribution of three pathways for propionate production within the human gut microbiota. ISME J. 8, 1323–1335 (2014).
pubmed: 24553467
pmcid: 4030238
doi: 10.1038/ismej.2014.14
Cherbuy, C. et al. Expression of mitochondrial HMGCoA synthase and glutaminase in the colonic mucosa is modulated by bacterial species. Eur. J. Biochem 271, 87–95 (2004).
pubmed: 14686922
doi: 10.1046/j.1432-1033.2003.03908.x
Rodríguez-Carrio, J. et al. Intestinal dysbiosis is associated with altered short-chain fatty acids and serum-free fatty acids in systemic lupus erythematosus. Front. Immunol. 8, 23 (2017).
pubmed: 28167944
pmcid: 5253653
Mosely, S. I. S. et al. Rational selection of syngeneic preclinical tumor models for immunotherapeutic drug discovery. Cancer Immunol. Res. 5, 29–41 (2017).
pubmed: 27923825
doi: 10.1158/2326-6066.CIR-16-0114
Lu, Y., Yao, D. & Chen, C. 2-Hydrazinoquinoline as a derivatization agent for LC-MS-based metabolomic investigation of diabetic ketoacidosis. Metabolites 3, 993–1010 (2013).
pubmed: 24958262
pmcid: 3937830
doi: 10.3390/metabo3040993
Furet, J.-P. et al. Comparative assessment of human and farm animal faecal microbiota using real-time quantitative PCR. FEMS Microbiol. Ecol. 68, 351–362 (2009).
pubmed: 19302550
doi: 10.1111/j.1574-6941.2009.00671.x
Lopez-Siles, M. et al. Mucosa-associated Faecalibacterium prausnitzii and Escherichia coli co-abundance can distinguish irritable bowel syndrome and inflammatory bowel disease phenotypes. Int. J. Med. Microbiol. IJMM 304, 464–475 (2014).
pubmed: 24713205
doi: 10.1016/j.ijmm.2014.02.009
Huijsdens, X. W. et al. Quantification of bacteria adherent to gastrointestinal mucosa by real-time PCR. J. Clin. Microbiol. 40, 4423–4427 (2002).
pubmed: 12454130
pmcid: 154607
doi: 10.1128/JCM.40.12.4423-4427.2002
Tong, J., Liu, C., Summanen, P., Xu, H. & Finegold, S. M. Application of quantitative real-time PCR for rapid identification of Bacteroides fragilis group and related organisms in human wound samples. Anaerobe 17, 64–68 (2011).
pubmed: 21439390
doi: 10.1016/j.anaerobe.2011.03.004
Pitoiset, F. et al. Deep phenotyping of immune cell populations by optimized and standardized flow cytometry analyses. Cytom. Part J. Int. Soc. Anal. Cytol. 93, 793–802 (2018).
doi: 10.1002/cyto.a.23570
Coutzac, C. Metadata and data associated with the published article: systemic short chain fatty acids limit antitumor effect of CTLA-4 blockade in hosts with cancer. https://doi.org/10.6084/m9.figshare.12018450 (2020).