[Design of an Efficient Inhibitor for the Influenza A Virus M2 Ion Channel].


Journal

Molekuliarnaia biologiia
ISSN: 0026-8984
Titre abrégé: Mol Biol (Mosk)
Pays: Russia (Federation)
ID NLM: 0105454

Informations de publication

Date de publication:
Historique:
received: 02 04 2019
accepted: 19 09 2019
entrez: 12 5 2020
pubmed: 12 5 2020
medline: 20 8 2020
Statut: ppublish

Résumé

Influenza A virus is capable of rapidly infecting large human populations, warranting the development of novel drugs to efficiently inhibit virus replication. A transmembrane ion channel formed by the M2 protein plays an important role in influenza virus replication. A reasonable approach to designing an effective antivirus drug is constructing a molecule that binds in the M2 transmembrane proton channel, blocks H^(+) proton diffusion through the channel, and thus the influenza A virus cycle. The known anti-influenza drugs amantadine and rimantadine have a weak effect on influenza A virus replication. A new class of positively charged molecules, diazabicyclooctane derivatives with a constant charge of +2, was proposed to block proton diffusion through the M2 ion channel. Molecular dynamics simulations were performed to study the temperature fluctuations in the M2 structure, and ionization states of histidine residues were established at physiological pH values. Two types of diazabicyclooctane derivatives were analyzed for binding with the M2 ion channel. An optimal structure was determined for a blocker to most efficiently bind with the M2 ion channel and block proton diffusion. The new molecule is advantageous over amantadine and rimantadine in having a positive charge of +2, which creates a positive electrostatic potential barrier to proton transport through the M2 ion channel in addition to a steric barrier.

Identifiants

pubmed: 32392203
doi: 10.31857/S0026898420020160
doi:

Substances chimiques

Antiviral Agents 0
Aza Compounds 0
Cyclooctanes 0
M2 protein, Influenza A virus 0
Viral Matrix Proteins 0
Rimantadine 0T2EF4JQTU
Amantadine BF4C9Z1J53

Types de publication

Journal Article

Langues

rus

Sous-ensembles de citation

IM

Pagination

321-332

Auteurs

Yu N Vorobjev (YN)

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Novosibirsk, 630090 Russia.
Novosibirsk State University, Novosibirsk, 630090 Russia.
ynvorob@niboch.nsc.ru.

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Classifications MeSH