A Coupled Mathematical Model of the Intracellular Replication of Dengue Virus and the Host Cell Immune Response to Infection.

computational simulation dengue virus innate immune response mathematical model virus replication

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2020
Historique:
received: 21 07 2019
accepted: 27 03 2020
entrez: 16 5 2020
pubmed: 16 5 2020
medline: 16 5 2020
Statut: epublish

Résumé

Dengue virus (DV) is a positive-strand RNA virus of the

Identifiants

pubmed: 32411105
doi: 10.3389/fmicb.2020.00725
pmc: PMC7200986
doi:

Types de publication

Journal Article

Langues

eng

Pagination

725

Subventions

Organisme : NIAID NIH HHS
ID : R01 AI078881
Pays : United States

Informations de copyright

Copyright © 2020 Zitzmann, Schmid, Ruggieri, Perelson, Binder, Bartenschlager and Kaderali.

Références

Future Microbiol. 2008 Apr;3(2):155-65
pubmed: 18366336
Biochimie. 2007 Jun-Jul;89(6-7):812-8
pubmed: 17570575
Bioinformatics. 2015 Nov 1;31(21):3558-60
pubmed: 26142188
Science. 2005 Jul 22;309(5734):623-6
pubmed: 15947137
Hepatology. 2012 Dec;56(6):2082-93
pubmed: 22711689
J Interferon Cytokine Res. 2004 Jan;24(1):1-19
pubmed: 14980080
Viruses. 2012 Mar;4(3):397-413
pubmed: 22590678
Curr Opin Virol. 2011 Dec;1(6):519-25
pubmed: 22328912
PLoS Pathog. 2017 Jun 8;13(6):e1006343
pubmed: 28594932
PLoS Comput Biol. 2016 May 23;12(5):e1004951
pubmed: 27213681
Cell. 2002 Mar 8;108(5):717-25
pubmed: 11893341
J Virol. 2009 Aug;83(16):8276-81
pubmed: 19494017
Database (Oxford). 2010 Aug 05;2010:baq020
pubmed: 20689021
PLoS Pathog. 2015 Dec 31;11(12):e1005345
pubmed: 26720415
Nature. 1995 Jan 12;373(6510):123-6
pubmed: 7816094
Science. 1996 Apr 5;272(5258):74-9
pubmed: 8600540
BMC Biol. 2013 Sep 03;11:96
pubmed: 24020860
Cell Rep. 2019 May 28;27(9):2579-2592.e6
pubmed: 31141684
PLoS Pathog. 2013;9(8):e1003561
pubmed: 23990783
J Virol. 2012 Aug;86(15):7806-17
pubmed: 22593159
J Immunol. 1993 Mar 1;150(5):1715-26
pubmed: 7679692
Nature. 2013 Apr 25;496(7446):504-7
pubmed: 23563266
Cell Mol Life Sci. 2010 Aug;67(16):2773-86
pubmed: 20372965
J Interferon Cytokine Res. 2015 Jun;35(6):421-30
pubmed: 25629430
Curr Opin Virol. 2012 Dec;2(6):740-7
pubmed: 23036609
J Theor Biol. 2000 Apr 7;203(3):285-301
pubmed: 10716909
FEBS J. 2013 Jun;280(11):2564-71
pubmed: 23581573
Front Microbiol. 2018 Jul 11;9:1546
pubmed: 30050523
Philos Trans R Soc Lond B Biol Sci. 2015 Apr 5;370(1665):
pubmed: 25688023
J Virol. 2018 May 14;92(11):
pubmed: 29563295
Nat Rev Microbiol. 2018 Feb 12;16(3):125-142
pubmed: 29430005
Cell Host Microbe. 2009 Apr 23;5(4):365-75
pubmed: 19380115
Virus Res. 2016 Jun 15;218:96-101
pubmed: 26409026
Clin Epidemiol. 2013 Aug 20;5:299-309
pubmed: 23990732
PLoS One. 2013 Sep 30;8(9):e74335
pubmed: 24098642
J Virol. 2007 Jan;81(2):750-60
pubmed: 17035310
Nature. 1995 Jan 12;373(6510):117-22
pubmed: 7529365
PLoS Pathog. 2015 Nov 12;11(11):e1005277
pubmed: 26562291
Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14333-8
pubmed: 14612562
Cytokine Growth Factor Rev. 2014 Oct;25(5):543-50
pubmed: 24909568
Cell Rep. 2018 Jul 10;24(2):320-328
pubmed: 29996094
Future Virol. 2014;9(12):1061-1075
pubmed: 25983854
J R Soc Interface. 2015 Feb 6;12(103):
pubmed: 25519990
J Theor Biol. 2008 Sep 7;254(1):178-96
pubmed: 18572196
PLoS Comput Biol. 2013;9(11):e1003372
pubmed: 24278009
J Clin Bioinforma. 2012 Feb 13;2(1):5
pubmed: 22330733
Bioinformatics. 2010 Jul 1;26(13):1675-6
pubmed: 20444837
Bioinformatics. 2009 Aug 1;25(15):1923-9
pubmed: 19505944
J R Soc Interface. 2014 Jul 6;11(96):
pubmed: 24829280
Nature. 1997 May 8;387(6629):188-91
pubmed: 9144290
Science. 1996 Mar 15;271(5255):1582-6
pubmed: 8599114
Cytokine Growth Factor Rev. 2017 Oct;37:17-27
pubmed: 28709747
J Virol. 2004 Mar;78(6):2701-10
pubmed: 14990690
Viruses. 2010 Feb;2(2):676-91
pubmed: 21994652
Cell. 2015 Jul 30;162(3):488-92
pubmed: 26232221
Proc Natl Acad Sci U S A. 1997 Jun 24;94(13):6971-6
pubmed: 9192676
Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):3991-6
pubmed: 23431163
Virus Res. 2016 Feb 2;213:90-99
pubmed: 26592173
Infect Ecol Epidemiol. 2013 Aug 30;3:
pubmed: 24003364
Nat Rev Immunol. 2002 Jan;2(1):28-36
pubmed: 11905835
J Hepatol. 2013 Dec;59(6):1331-41
pubmed: 23933585
J Virol. 2009 Jul;83(13):6383-90
pubmed: 19369346
Cell Rep. 2017 Feb 28;18(9):2113-2123
pubmed: 28249158
mBio. 2015 May 12;6(3):e00553-15
pubmed: 25968648
Pediatr Crit Care Med. 2011 Jan;12(1):90-100
pubmed: 20639791
Nat Rev Immunol. 2015 Dec;15(12):745-59
pubmed: 26603900
Exp Mol Med. 2013 Apr 12;45:e18
pubmed: 23579383
PLoS Negl Trop Dis. 2011 Jan 04;5(1):e926
pubmed: 21245912
Proc Natl Acad Sci U S A. 1996 Apr 30;93(9):4398-402
pubmed: 8633078
Mol Syst Biol. 2012 May 22;8:584
pubmed: 22617958
J Infect Dis. 2009 Oct 15;200(8):1261-70
pubmed: 19754307
J Virol. 2009 Jun;83(11):5408-18
pubmed: 19279106
Antiviral Res. 2016 Jul;131:141-7
pubmed: 27181378
PLoS Comput Biol. 2016 Nov 17;12(11):e1005194
pubmed: 27855153
Wkly Epidemiol Rec. 2016 Jul 29;91(30):349-64
pubmed: 27476189
Science. 1998 Oct 2;282(5386):103-7
pubmed: 9756471
Nat Rev Gastroenterol Hepatol. 2015 Aug;12(8):437-45
pubmed: 26122475
Open Microbiol J. 2008;2:49-59
pubmed: 19088911
PLoS One. 2016 Sep 02;11(9):e0162366
pubmed: 27588423
PLoS Pathog. 2012;8(12):e1003056
pubmed: 23236278
J Theor Biol. 2009 Sep 21;260(2):308-31
pubmed: 19539630

Auteurs

Carolin Zitzmann (C)

Center for Functional Genomics of Microbes, Institute of Bioinformatics, University Medicine Greifswald, Greifswald, Germany.
Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, NM, United States.

Bianca Schmid (B)

Department of Infectious Diseases, Molecular Virology, Heidelberg University, Heidelberg, Germany.

Alessia Ruggieri (A)

Department of Infectious Diseases, Molecular Virology, Heidelberg University, Heidelberg, Germany.

Alan S Perelson (AS)

Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, NM, United States.

Marco Binder (M)

Research Group "Dynamics of Early Viral Infection and the Innate Antiviral Response", Division Virus-Associated Carcinogenesis (F170), German Cancer Research Center (DKFZ), Heidelberg, Germany.

Ralf Bartenschlager (R)

Department of Infectious Diseases, Molecular Virology, Heidelberg University, Heidelberg, Germany.

Lars Kaderali (L)

Center for Functional Genomics of Microbes, Institute of Bioinformatics, University Medicine Greifswald, Greifswald, Germany.

Classifications MeSH