Divergent and linked selection shape patterns of genomic differentiation between European and North American Atlantic salmon (Salmo salar).
adaptation
conservation genetics
fish
genomics
population genetics
Journal
Molecular ecology
ISSN: 1365-294X
Titre abrégé: Mol Ecol
Pays: England
ID NLM: 9214478
Informations de publication
Date de publication:
06 2020
06 2020
Historique:
received:
11
04
2019
revised:
17
04
2020
accepted:
11
05
2020
pubmed:
21
5
2020
medline:
5
6
2021
entrez:
21
5
2020
Statut:
ppublish
Résumé
As populations diverge many processes can shape genomic patterns of differentiation. Regions of high differentiation can arise due to divergent selection acting on selected loci, genetic hitchhiking of nearby loci, or through repeated selection against deleterious alleles (linked background selection); this divergence may then be further elevated in regions of reduced recombination. Atlantic salmon (Salmo salar) from Europe and North America diverged >600,000 years ago and despite some evidence of secondary contact, the majority of genetic data indicate substantial divergence between lineages. This deep divergence with potential gene flow provides an opportunity to investigate the role of different mechanisms that shape the genomic landscape during early speciation. Here, using 184,295 single nucleotide polymorphisms (SNPs) and 80 populations, we investigate the genomic landscape of differentiation across the Atlantic Ocean with a focus on highly differentiated regions and the processes shaping them. We found evidence of high (mean F
Banques de données
Dryad
['10.5061/dryad.hdr7sqvfc']
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
2160-2175Informations de copyright
© 2020 John Wiley & Sons Ltd.
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