Deep learning enables sleep staging from photoplethysmogram for patients with suspected sleep apnea.

deep learning obstructive sleep apnea photoplethysmogram recurrent neural networks sleep staging

Journal

Sleep
ISSN: 1550-9109
Titre abrégé: Sleep
Pays: United States
ID NLM: 7809084

Informations de publication

Date de publication:
12 11 2020
Historique:
received: 10 12 2019
revised: 05 03 2020
pubmed: 22 5 2020
medline: 15 4 2021
entrez: 22 5 2020
Statut: ppublish

Résumé

Accurate identification of sleep stages is essential in the diagnosis of sleep disorders (e.g. obstructive sleep apnea [OSA]) but relies on labor-intensive electroencephalogram (EEG)-based manual scoring. Furthermore, long-term assessment of sleep relies on actigraphy differentiating only between wake and sleep periods without identifying specific sleep stages and having low reliability in identifying wake periods after sleep onset. To address these issues, we aimed to develop an automatic method for identifying the sleep stages from the photoplethysmogram (PPG) signal obtained with a simple finger pulse oximeter. PPG signals from the diagnostic polysomnographies of susptected OSA patients (n = 894) were utilized to develop a combined convolutional and recurrent neural network. The deep learning model was trained individually for three-stage (wake/NREM/REM), four-stage (wake/N1+N2/N3/REM), and five-stage (wake/N1/N2/N3/REM) classification of sleep. The three-stage model achieved an epoch-by-epoch accuracy of 80.1% with Cohen's κ of 0.65. The four- and five-stage models achieved 68.5% (κ = 0.54), and 64.1% (κ = 0.51) accuracies, respectively. With the five-stage model, the total sleep time was underestimated with a mean bias error (SD) of of 7.5 (55.2) minutes. The PPG-based deep learning model enabled accurate estimation of sleep time and differentiation between sleep stages with a moderate agreement to manual EEG-based scoring. As PPG is already included in ambulatory polygraphic recordings, applying the PPG-based sleep staging could improve their diagnostic value by enabling simple, low-cost, and reliable monitoring of sleep and help assess otherwise overlooked conditions such as REM-related OSA.

Identifiants

pubmed: 32436942
pii: 5841624
doi: 10.1093/sleep/zsaa098
pmc: PMC7658638
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© Sleep Research Society 2020. Published by Oxford University Press on behalf of the Sleep Research Society.

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Auteurs

Henri Korkalainen (H)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland.

Juhani Aakko (J)

CGI Suomi Oy, Helsinki, Finland.

Brett Duce (B)

Department of Respiratory and Sleep Medicine, Sleep Disorders Centre, Princess Alexandra Hospital, Brisbane, Queensland, Australia.
Institute of Health and Biomedical Innovation, Queensland University of Technology, Brisbane, Queensland, Australia.

Samu Kainulainen (S)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland.

Akseli Leino (A)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland.

Sami Nikkonen (S)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland.

Isaac O Afara (IO)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
School of Information Technology and Electrical Engineering, University of Queensland, Brisbane, Queensland, Australia.

Sami Myllymaa (S)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland.

Juha Töyräs (J)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland.
School of Information Technology and Electrical Engineering, University of Queensland, Brisbane, Queensland, Australia.

Timo Leppänen (T)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
Diagnostic Imaging Center, Kuopio University Hospital, Kuopio, Finland.

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