Regulation of hepatic microRNAs in response to early stage Echinococcus multilocularis egg infection in C57BL/6 mice.


Journal

PLoS neglected tropical diseases
ISSN: 1935-2735
Titre abrégé: PLoS Negl Trop Dis
Pays: United States
ID NLM: 101291488

Informations de publication

Date de publication:
05 2020
Historique:
received: 11 07 2019
accepted: 05 03 2020
entrez: 23 5 2020
pubmed: 23 5 2020
medline: 18 7 2020
Statut: epublish

Résumé

We present a comprehensive analysis of the hepatic miRNA transcriptome at one month post-infection of experimental primary alveolar echinococcosis (AE), a parasitic infection caused upon ingestion of E. multilocularis eggs. Liver tissues were collected from infected and non-infected C57BL/6 mice, then small RNA libraries were prepared for next-generation sequencing (NGS). We conducted a Stem-loop RT-qPCR for validation of most dysregulated miRNAs. In infected mice, the expression levels of 28 miRNAs were significantly altered. Of these, 9 were up-regulated (fold change (FC) ≥ 1.5) and 19 were down-regulated (FC ≤ 0.66) as compared to the non-infected controls. In infected livers, mmu-miR-148a-3p and mmu-miR-101b-3p were 8- and 6-fold down-regulated, respectively, and the expression of mmu-miR-22-3p was reduced by 50%, compared to non-infected liver tissue. Conversely, significantly higher hepatic levels were noted for Mus musculus (mmu)-miR-21a-5p (FC = 2.3) and mmu-miR-122-5p (FC = 1.8). In addition, the relative mRNA expression levels of five genes (vegfa, mtor, hif1-α, fasn and acsl1) that were identified as targets of down-regulated miRNAs were significantly enhanced. All the five genes exhibited a higher expression level in livers of E. multilocularis infected mice compared to non-infected mice. Finally, we studied the issue related to functionally mature arm selection preference (5p and/or 3p) from the miRNA precursor and showed that 9 pre-miRNAs exhibited different arm selection preferences in normal versus infected liver tissues. In conclusion, this study provides first evidence that miRNAs are regulated early in primary murine AE. Our findings raise intriguing questions such as (i) how E. multilocularis affects hepatic miRNA expression;(ii) what are the alterations in miRNA expression patterns in more advanced AE-stages; and (iii) which hepatic cellular, metabolic and/or immunologic processes are modulated through altered miRNAs in AE. Thus, further research on the regulation of miRNAs during AE is needed, since miRNAs constitute an attractive potential option for development of novel therapeutic approaches against AE.

Identifiants

pubmed: 32442168
doi: 10.1371/journal.pntd.0007640
pii: PNTD-D-19-01183
pmc: PMC7244097
doi:

Substances chimiques

MicroRNAs 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0007640

Déclaration de conflit d'intérêts

I have read the journal’s policy and the authors of this manuscript have the following competing interests: Sebastian Strempel is employee of Microsynth AG.

Références

J Biomed Sci. 2014 Oct 05;21:95
pubmed: 25287248
Bull World Health Organ. 1996;74(3):231-42
pubmed: 8789923
J Helminthol. 2002 Mar;76(1):31-6
pubmed: 12018193
Am J Transl Res. 2018 Nov 15;10(11):3310-3321
pubmed: 30662588
Biosci Trends. 2017 Jan 16;10(6):482-488
pubmed: 27916780
Bioinformatics. 2015 Jan 15;31(2):166-9
pubmed: 25260700
Mol Cells. 2005 Feb 28;19(1):1-15
pubmed: 15750334
Am J Physiol Cell Physiol. 2018 Jan 1;314(1):C43-C52
pubmed: 28835435
J Hepatol. 2008 Jul;49(1):72-7
pubmed: 18485517
N Engl J Med. 2009 Oct 8;361(15):1437-47
pubmed: 19812400
PLoS One. 2015 Jun 05;10(6):e0128628
pubmed: 26046780
Parasitol Res. 2006 Dec;100(1):131-9
pubmed: 16858614
RNA Biol. 2012 Feb;9(2):137-42
pubmed: 22258222
Nat Med. 2015 Nov;21(11):1280-9
pubmed: 26437365
Genome Res. 2009 Jan;19(1):92-105
pubmed: 18955434
World J Gastroenterol. 2015 Mar 28;21(12):3492-8
pubmed: 25834313
Nucleic Acids Res. 2014 Jan;42(Database issue):D68-73
pubmed: 24275495
Cell Death Dis. 2017 May 18;8(5):e2804
pubmed: 28518144
Oncotarget. 2016 Nov 29;7(48):78566-78576
pubmed: 27713175
Nucleic Acids Res. 2015 Jan;43(Database issue):D130-7
pubmed: 25392425
Parasitology. 2017 Jul;144(8):1079-1087
pubmed: 28270244
Int J Parasitol. 2017 Nov;47(13):823-830
pubmed: 28739251
Parasit Vectors. 2013 Sep 20;6:272
pubmed: 24330517
J Hepatol. 2014 Mar;60(3):590-8
pubmed: 24211739
Int J Mol Sci. 2016 Nov 16;17(11):
pubmed: 27854329
Cell Death Dis. 2017 Jul 13;8(7):e2916
pubmed: 28703810
Nucleic Acids Res. 2019 Apr 23;47(7):3353-3364
pubmed: 30820533
Parasitology. 2010 Mar;137(3):557-68
pubmed: 19961650
Ann Clin Microbiol Antimicrob. 2013 Jan 02;12:1
pubmed: 23281596
BMC Infect Dis. 2016 Nov 30;16(1):724
pubmed: 27899092
Nat Struct Mol Biol. 2008 Apr;15(4):354-63
pubmed: 18376413
Genome Biol. 2014;15(12):550
pubmed: 25516281
PLoS Genet. 2015 Mar 20;11(3):e1005064
pubmed: 25793259
Int J Parasitol. 2015 Mar;45(4):253-67
pubmed: 25659494
Int J Parasitol Drugs Drug Resist. 2014 Mar 24;4(2):85-94
pubmed: 25057458
Science. 2005 Sep 2;309(5740):1577-81
pubmed: 16141076
Nat Genet. 2005 Jul;37(7):766-70
pubmed: 15965474
J Am Soc Nephrol. 2017 Apr;28(4):1188-1199
pubmed: 27837150
Front Microbiol. 2017 Apr 13;8:586
pubmed: 28450853
Oncotarget. 2017 Jul 11;8(28):46691-46703
pubmed: 28493839
Int J Mol Sci. 2018 Aug 19;19(8):
pubmed: 30126252
Comp Biochem Physiol B. 1993 Jul-Aug;105(3-4):517-21
pubmed: 8365107
Int J Cancer. 2017 Nov 15;141(10):2082-2092
pubmed: 28758198
Cell. 1993 Dec 3;75(5):843-54
pubmed: 8252621
Nucleic Acids Res. 2008 Jan;36(Database issue):D154-8
pubmed: 17991681
Bioinformatics. 2010 Oct 1;26(19):2460-1
pubmed: 20709691
J Biomed Biotechnol. 2010;2010:923193
pubmed: 20339517
PLoS One. 2011 Jan 19;6(1):e14557
pubmed: 21283804
ScientificWorldJournal. 2013;2013:924206
pubmed: 23431261
BMC Syst Biol. 2012;6 Suppl 2:S14
pubmed: 23282006
Int J Clin Exp Pathol. 2010 Mar 25;3(5):505-14
pubmed: 20606731
FASEB J. 2015 May;29(5):1859-68
pubmed: 25630970
Biomed Res Int. 2015;2015:168358
pubmed: 26075215
J Clin Invest. 2011 Apr;121(4):1386-96
pubmed: 21364282
Nucleic Acids Res. 2006 May 12;34(9):2558-69
pubmed: 16698962
Vet Parasitol. 2005 Jun 30;130(3-4):213-22
pubmed: 15869842
Lung Cancer. 2009 Nov;66(2):169-75
pubmed: 19223090
Nucleic Acids Res. 2014 Jan;42(Database issue):D749-55
pubmed: 24316576
Acta Trop. 2010 Apr;114(1):1-16
pubmed: 19931502
Nat Rev Drug Discov. 2013 Nov;12(11):847-65
pubmed: 24172333
Proc Natl Acad Sci U S A. 2007 Jun 5;104(23):9667-72
pubmed: 17535905
Nat Rev Immunol. 2016 Apr 28;16(5):279-94
pubmed: 27121651
Parasite. 2016;23:23
pubmed: 27235195
Nucleic Acids Res. 2005 Nov 27;33(20):e179
pubmed: 16314309
Trends Parasitol. 2016 Jan;32(1):71-86
pubmed: 26489492
Bioinformatics. 2010 Jan 1;26(1):139-40
pubmed: 19910308
J Cancer. 2016 Jun 21;7(10):1233-41
pubmed: 27390598
Genome Res. 2007 Dec;17(12):1850-64
pubmed: 17989254
Br J Cancer. 2010 Oct 12;103(8):1215-20
pubmed: 20842113
J Cell Commun Signal. 2016 Dec;10(4):347-354
pubmed: 27619687
PLoS One. 2010 Apr 01;5(4):e9779
pubmed: 20368974
Carcinogenesis. 2013 Feb;34(2):426-35
pubmed: 23104180
Sci Rep. 2016 Jun 16;6:28176
pubmed: 27307030
Nat Med. 2015 Nov;21(11):1290-7
pubmed: 26501192
Cancer Res. 2015 Jul 15;75(14):2875-85
pubmed: 26062558
Proc Natl Acad Sci U S A. 2015 Mar 10;112(10):E1106-15
pubmed: 25713380
Cold Spring Harb Perspect Med. 2012 Sep 01;2(9):a006452
pubmed: 22951440
Cell Mol Life Sci. 2017 Jul;74(14):2613-2625
pubmed: 28238105
Parasite. 2014;21:70
pubmed: 25526545
Cell. 2010 Apr 2;141(1):129-41
pubmed: 20371350
Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14863-8
pubmed: 9843981
J Biol Chem. 2009 Oct 9;284(41):27816-26
pubmed: 19648649
Cell. 2009 Jan 23;136(2):215-33
pubmed: 19167326
Am J Transl Res. 2017 Feb 15;9(2):520-532
pubmed: 28337280
Nat Rev Genet. 2011 Feb;12(2):99-110
pubmed: 21245828
Sci Rep. 2017 Jul 13;7(1):5270
pubmed: 28706254
Perspect Clin Res. 2016 Apr-Jun;7(2):68-74
pubmed: 27141472
J Transl Med. 2016 May 20;14(1):143
pubmed: 27197967
Vet Parasitol. 2015 Aug 15;212(1-2):47-53
pubmed: 26095949
Antioxid Redox Signal. 2014 Dec 20;21(18):2469-82
pubmed: 24844779
RNA Biol. 2017 Oct 3;14(10):1326-1334
pubmed: 26853707
Bioinformatics. 2013 Jan 1;29(1):15-21
pubmed: 23104886
Nat Biotechnol. 2008 Mar;26(3):303-4
pubmed: 18327243
Cell. 2005 Jan 14;120(1):15-20
pubmed: 15652477
Acta Pharm Sin B. 2015 Mar;5(2):145-50
pubmed: 26579440
Wiley Interdiscip Rev RNA. 2012 May-Jun;3(3):311-30
pubmed: 22072587
Appl Parasitol. 1996 Dec;37(4):245-52
pubmed: 9060171
J Med Case Rep. 2017 Apr 18;11(1):113
pubmed: 28416007
Parasit Vectors. 2017 Jan 11;10(1):21
pubmed: 28077161
Methods Mol Biol. 2011;694:49-61
pubmed: 21082427
Nat Rev Mol Cell Biol. 2014 Aug;15(8):509-24
pubmed: 25027649
Cell. 2009 Jun 12;137(6):1005-17
pubmed: 19524505
Cell Metab. 2013 Sep 3;18(3):312-24
pubmed: 23850315
Sci Rep. 2016 Dec 05;6:38262
pubmed: 27917915
Nucleic Acids Res. 2008 Jan;36(Database issue):D480-4
pubmed: 18077471
Sci Rep. 2016 Jan 28;6:20065
pubmed: 26817861
Clin Microbiol Rev. 2004 Jan;17(1):107-35
pubmed: 14726458
Cell Metab. 2006 Feb;3(2):87-98
pubmed: 16459310
J Parasitol. 2015 Jun;101(3):369-73
pubmed: 25700027
Hepatology. 2010 May;51(5):1735-43
pubmed: 20432256
Nat Rev Cancer. 2015 Jun;15(6):321-33
pubmed: 25998712
J Med Microbiol. 2008 Nov;57(Pt 11):1420-1423
pubmed: 18927422
Cell Mol Biol Lett. 2016 Jul 28;21:3
pubmed: 28536606
Blood. 2008 May 15;111(10):4997-5007
pubmed: 18337563
Acta Trop. 2017 Feb;166:39-44
pubmed: 27810427
Front Physiol. 2012 Sep 12;3:363
pubmed: 22988444
Int J Parasitol. 2017 Sep;47(10-11):675-686
pubmed: 28668323
PLoS One. 2014 Mar 17;9(3):e91638
pubmed: 24637903
BMC Genomics. 2012;13 Suppl 1:S13
pubmed: 22369582
PLoS One. 2016 Feb 22;11(2):e0149440
pubmed: 26901164
Nucleic Acids Res. 2016 Jul 8;44(W1):W135-41
pubmed: 27105848
Nat Rev Gastroenterol Hepatol. 2013 Sep;10(9):542-52
pubmed: 23689081
BMC Genomics. 2014 Nov 21;15:1010
pubmed: 25416156
Biochim Biophys Acta. 2016 Dec;1861(12 Pt B):2047-2052
pubmed: 26968099
Biomol Concepts. 2017 Dec 20;8(5-6):203-212
pubmed: 29161231
Mol Biochem Parasitol. 2017 Jun;214:91-100
pubmed: 28385564
PLoS One. 2014 Jan 17;9(1):e86033
pubmed: 24465854
Virol J. 2014 Apr 01;11:64
pubmed: 24690114

Auteurs

Ghalia Boubaker (G)

Department of Infectious Diseases and Pathobiology, Institute of Parasitology, University of Bern, Bern, Switzerland.
Department of Clinical Biology B, Laboratory of Parasitology and Mycology, University of Monastir, Monastir, Tunisia.

Sebastian Strempel (S)

Microsynth AG, Balgach, Switzerland.

Andrew Hemphill (A)

Department of Infectious Diseases and Pathobiology, Institute of Parasitology, University of Bern, Bern, Switzerland.

Norbert Müller (N)

Department of Infectious Diseases and Pathobiology, Institute of Parasitology, University of Bern, Bern, Switzerland.

Junhua Wang (J)

Department of Infectious Diseases and Pathobiology, Institute of Parasitology, University of Bern, Bern, Switzerland.

Bruno Gottstein (B)

Department of Infectious Diseases and Pathobiology, Institute of Parasitology, University of Bern, Bern, Switzerland.
Institute of Infectious Diseases, Faculty of Medicine, University of Berne, Berne, Switzerland.

Markus Spiliotis (M)

Department of Infectious Diseases and Pathobiology, Institute of Parasitology, University of Bern, Bern, Switzerland.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH