DCU-Net: Multi-scale U-Net for brain tumor segmentation.

Brain tumor segmentation DCU-Net U-Net dilated convolution multi-scale spatial pyramid pooling

Journal

Journal of X-ray science and technology
ISSN: 1095-9114
Titre abrégé: J Xray Sci Technol
Pays: Netherlands
ID NLM: 9000080

Informations de publication

Date de publication:
2020
Historique:
pubmed: 24 5 2020
medline: 26 8 2021
entrez: 24 5 2020
Statut: ppublish

Résumé

Brain tumor segmentation plays an important role in assisting diagnosis of disease, treatment plan planning, and surgical navigation. This study aims to improve the accuracy of tumor boundary segmentation using the multi-scale U-Net network. In this study, a novel U-Net with dilated convolution (DCU-Net) structure is proposed for brain tumor segmentation based on the classic U-Net structure. First, the MR brain tumor images are pre-processed to alleviate the class imbalance problem by reducing the input of the background pixels. Then, the multi-scale spatial pyramid pooling is used to replace the max pooling at the end of the down-sampling path. It can expand the feature receptive field while maintaining image resolution. Finally, a dilated convolution residual block is combined to improve the skip connections in the training networks to improve the network's ability to recognize the tumor details. The proposed model has been evaluated using the Brain Tumor Segmentation (BRATS) 2018 Challenge training dataset and achieved the dice similarity coefficients (DSC) score of 0.91, 0.78 and 0.83 for whole tumor, core tumor and enhancing tumor segmentation, respectively. The experiment results indicate that the proposed model yields a promising performance in automated brain tumor segmentation.

Sections du résumé

BACKGROUND
Brain tumor segmentation plays an important role in assisting diagnosis of disease, treatment plan planning, and surgical navigation.
OBJECTIVE
This study aims to improve the accuracy of tumor boundary segmentation using the multi-scale U-Net network.
METHODS
In this study, a novel U-Net with dilated convolution (DCU-Net) structure is proposed for brain tumor segmentation based on the classic U-Net structure. First, the MR brain tumor images are pre-processed to alleviate the class imbalance problem by reducing the input of the background pixels. Then, the multi-scale spatial pyramid pooling is used to replace the max pooling at the end of the down-sampling path. It can expand the feature receptive field while maintaining image resolution. Finally, a dilated convolution residual block is combined to improve the skip connections in the training networks to improve the network's ability to recognize the tumor details.
RESULTS
The proposed model has been evaluated using the Brain Tumor Segmentation (BRATS) 2018 Challenge training dataset and achieved the dice similarity coefficients (DSC) score of 0.91, 0.78 and 0.83 for whole tumor, core tumor and enhancing tumor segmentation, respectively.
CONCLUSIONS
The experiment results indicate that the proposed model yields a promising performance in automated brain tumor segmentation.

Identifiants

pubmed: 32444591
pii: XST200650
doi: 10.3233/XST-200650
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

709-726

Auteurs

Tiejun Yang (T)

Key Laboratory of Grain Information Processing and Control (Henan University of Technology), Ministry of Education, China.
School of Artificial Intelligence and Big Data, Henan University of Technology, Zhengzhou, China.

Yudan Zhou (Y)

School of Information Science and Technology, Henan University of Technology, Zhengzhou, China.

Lei Li (L)

School of Information Science and Technology, Henan University of Technology, Zhengzhou, China.

Chunhua Zhu (C)

School of Information Science and Technology, Henan University of Technology, Zhengzhou, China.

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