Analysis of the Level of Plasmid-Derived mRNA in the Presence of Residual Plasmid DNA by Two-Step Quantitative RT-PCR.

DNA contamination endogenous genome-derived mRNA genomic DNA nonsense-tail PCR primer nonsense-tail reverse transcription overexpression experiments plasmid DNA plasmid-derived mRNA

Journal

Methods and protocols
ISSN: 2409-9279
Titre abrégé: Methods Protoc
Pays: Switzerland
ID NLM: 101720073

Informations de publication

Date de publication:
23 May 2020
Historique:
received: 19 02 2020
revised: 19 05 2020
accepted: 21 05 2020
entrez: 28 5 2020
pubmed: 28 5 2020
medline: 28 5 2020
Statut: epublish

Résumé

In transfection experiments with mammalian cells aiming to overexpress a specific protein, it is often necessary to correctly quantify the level of the recombinant and the corresponding endogenous mRNA. In our case, mouse calvarial osteoblasts were transfected with a vector containing the complete

Identifiants

pubmed: 32456168
pii: mps3020040
doi: 10.3390/mps3020040
pmc: PMC7359704
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : This study was supported by internal performance-related resource allocation ("Leistungsorientierte Mittel") of the Justus Liebig University Giessen.
ID : no grant number

Références

Mol Ther. 2000 Mar;1(3):255-62
pubmed: 10933941
Biotechniques. 2012 Apr;52(4):263-70
pubmed: 22482442
Biotechniques. 1999 Sep;27(3):566-70, 572-4
pubmed: 10489616
Mol Cell Biol. 1988 Oct;8(10):4395-405
pubmed: 3185553
Nucleic Acids Res. 2012 Apr;40(7):e51
pubmed: 22228834
Biochemistry. 1982 Aug 17;21(17):3909-13
pubmed: 6289866
J Vis Exp. 2018 Jan 22;(131):
pubmed: 29443017
Biotechnol Bioeng. 1989 Oct 5;34(7):902-8
pubmed: 18588181
Gene. 1990 Jul 2;91(1):139-42
pubmed: 1698167
Sci Rep. 2017 Apr 24;7(1):1103
pubmed: 28439079
N Biotechnol. 2015 Dec 25;32(6):716-9
pubmed: 25796475
Biotechniques. 2002 Jun;32(6):1412-4, 1416-7
pubmed: 12074174
PLoS One. 2012;7(8):e41659
pubmed: 22927912
Biotechnol Bioeng. 1990 Nov;36(9):865-78
pubmed: 18597287
Biotechniques. 1993 Sep;15(3):532-4, 536-7
pubmed: 7692896
Nucleic Acids Res. 1997 Jan 15;25(2):449-50
pubmed: 9016578
Mol Cell Biol. 2002 Jun;22(12):4358-65
pubmed: 12024045
Biotechniques. 2001 Oct;31(4):776-8, 780, 782
pubmed: 11680707
Hum Mol Genet. 1995 Sep;4(9):1597-602
pubmed: 8541845
J Gene Med. 2006 Feb;8(2):175-85
pubmed: 16142816
Anal Biochem. 2002 Aug 15;307(2):304-15
pubmed: 12202248
Microbiome. 2018 Dec 17;6(1):226
pubmed: 30558668
Biotechniques. 1998 Oct;25(4):630-2, 634, 636 passim
pubmed: 9793645
PLoS One. 2015 Dec 02;10(12):e0143439
pubmed: 26630504
Anal Biochem. 2016 Feb 1;494:49-51
pubmed: 26545322
Nucleic Acids Res. 2001 May 1;29(9):e45
pubmed: 11328886
Mol Ther. 2003 Oct;8(4):646-53
pubmed: 14529838
Dis Model Mech. 2012 Jan;5(1):125-40
pubmed: 21954064
J Cell Biol. 1983 Jan;96(1):191-8
pubmed: 6826647
Semin Cell Dev Biol. 2014 Oct;34:24-32
pubmed: 24910447
J Virol. 2003 May;77(9):5275-85
pubmed: 12692229
Biotechniques. 1996 Jun;20(6):1012-4, 1016, 1018-20
pubmed: 8780872
Gene Ther. 1997 Aug;4(8):875-8
pubmed: 9338018
Nat Protoc. 2006;1(2):581-5
pubmed: 17406285

Auteurs

Barbara Ahlemeyer (B)

Institute for Anatomy and Cell Biology, Division of Medical Cell Biology, Justus Liebig University, Aulweg 123, 35385 Giessen, Germany.

Claudia Colasante (C)

Institute for Anatomy and Cell Biology, Division of Medical Cell Biology, Justus Liebig University, Aulweg 123, 35385 Giessen, Germany.

Eveline Baumgart-Vogt (E)

Institute for Anatomy and Cell Biology, Division of Medical Cell Biology, Justus Liebig University, Aulweg 123, 35385 Giessen, Germany.

Classifications MeSH