A Series Registration Framework to Recover Resting-State Functional Magnetic Resonance Data Degraded By Motion.


Journal

AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science
ISSN: 2153-4063
Titre abrégé: AMIA Jt Summits Transl Sci Proc
Pays: United States
ID NLM: 101539486

Informations de publication

Date de publication:
2020
Historique:
entrez: 2 6 2020
pubmed: 2 6 2020
medline: 2 6 2020
Statut: epublish

Résumé

Data retention is a significant problem in the medical imaging domain. For example, resting-state functional magnetic resonance images (rs-fMRIs) are invaluable for studying neurodevelopment but are highly susceptible to corruption due to patient motion. The effects of patient motion can be reduced through post-acquisition techniques such as volume registration. Traditional volume registration minimizes the global differences between all volumes in the rs-fMRI sequence and a designated reference volume. We suggest using the spatiotemporal relationships between subsequent image volumes to inform the registration: they are used initialize each volume registration to reduce local differences between volumes while minimizing global differences. We apply both the traditional and novel registration methods to a set of healthy human neonatal rs-fMRIs with significant motion artifacts (N=17). Both methods impacted the mean and standard deviation of the image sequences' correlation ratio matrices similarly; however, the novel framework was more effective in meeting gold standard motion thresholds.

Identifiants

pubmed: 32477679
pmc: PMC7233096

Types de publication

Journal Article

Langues

eng

Pagination

569-578

Subventions

Organisme : NLM NIH HHS
ID : T15 LM007059
Pays : United States

Informations de copyright

©2020 AMIA - All rights reserved.

Références

Neuron. 2015 Aug 5;87(3):657-70
pubmed: 26212711
Front Neuroinform. 2011 Aug 22;5:13
pubmed: 21897815
Radiol Technol. 2012 Jul-Aug;83(6):549-60
pubmed: 22763832
Cyberpsychol Behav. 2007 Jun;10(3):485-8
pubmed: 17594277
Semin Perinatol. 2015 Mar;39(2):130-40
pubmed: 25813667
Med Image Anal. 2001 Jun;5(2):143-56
pubmed: 11516708
Neuroimage. 2018 May 1;171:415-436
pubmed: 29278773
Brain Dev. 2007 Mar;29(2):83-91
pubmed: 16919409
Neuroimage. 2017 Jan 1;144(Pt A):74-82
pubmed: 27570108
Med Image Comput Comput Assist Interv. 2016 Oct;9902:54-62
pubmed: 28417113
Neuroimage. 2017 Nov 1;161:80-93
pubmed: 28803940
IEEE Trans Med Imaging. 2005 Jan;24(1):29-44
pubmed: 15638184
Neuroimage. 2015 May 15;112:267-277
pubmed: 25770991
Neuroimage. 2013 Aug 1;76:183-201
pubmed: 23499792
Arch Dis Child Fetal Neonatal Ed. 2013 May;98(3):F267-8
pubmed: 23013611
Neuroimage. 2007 Aug 1;37(1):90-101
pubmed: 17560126
Neuroimage. 2010 Aug 15;52(2):571-82
pubmed: 20420926
Neuroimage. 2006 Jul 1;31(3):1038-50
pubmed: 16600642
Front Neuroinform. 2014 Apr 28;8:44
pubmed: 24817849
Neuroimage. 2014 Jan 1;84:320-41
pubmed: 23994314
Pediatrics. 2016 Jul;138(1):
pubmed: 27354454
Pediatr Radiol. 2001 Apr;31(4):247-50
pubmed: 11321741
Neuroimage. 2017 Jul 1;154:33-42
pubmed: 27845256
Neuroimage. 2002 Oct;17(2):825-41
pubmed: 12377157
Neuroimage. 2012 Mar;60(1):623-32
pubmed: 22233733
Neuroimage. 2012 Jan 2;59(1):431-8
pubmed: 21810475
Neuroimage. 2010 Oct 15;53(1):247-56
pubmed: 20621638
Neuroimage. 2014 Jul 15;95:287-304
pubmed: 24657353
Neuroimage. 2012 Feb 1;59(3):2142-54
pubmed: 22019881
Neuroimage. 2014 Apr 15;90:449-68
pubmed: 24389422
Pediatr Radiol. 2014 Feb;44(2):181-6
pubmed: 24096802
Magn Reson Med. 1996 Mar;35(3):346-55
pubmed: 8699946

Auteurs

Jenna M Schabdach (JM)

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania.

Rafael Ceschin (R)

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania.
Department of Pediatric Radiology, UPMC Children's Hospital of Pittsburgh, Pittsburgh, Pennsylvania.

Vince K Lee (VK)

Department of Pediatric Radiology, UPMC Children's Hospital of Pittsburgh, Pittsburgh, Pennsylvania.

Vincent Schmithorst (V)

Department of Pediatric Radiology, UPMC Children's Hospital of Pittsburgh, Pittsburgh, Pennsylvania.

Ashok Panigrahy (A)

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania.
Department of Pediatric Radiology, UPMC Children's Hospital of Pittsburgh, Pittsburgh, Pennsylvania.

Classifications MeSH