Proteomic analysis reveals the direct recruitment of intrinsically disordered regions to stress granules in
Heat shock
Intrinsically disordered regions
Proteomic analysis
Saccharomyces cerevisiae
Stress granules
Journal
Journal of cell science
ISSN: 1477-9137
Titre abrégé: J Cell Sci
Pays: England
ID NLM: 0052457
Informations de publication
Date de publication:
09 07 2020
09 07 2020
Historique:
received:
30
01
2020
accepted:
15
05
2020
pubmed:
7
6
2020
medline:
22
6
2021
entrez:
7
6
2020
Statut:
epublish
Résumé
Stress granules (SGs) are stress-induced membraneless condensates that store non-translating mRNA and stalled translation initiation complexes. Although metazoan SGs are dynamic compartments where proteins can rapidly exchange with their surroundings, yeast SGs seem largely static. To gain a better understanding of yeast SGs, we identified proteins that sediment after heat shock using mass spectrometry. Proteins that sediment upon heat shock are biased toward a subset of abundant proteins that are significantly enriched in intrinsically disordered regions (IDRs). Heat-induced SG localization of over 80 proteins were confirmed using microscopy, including 32 proteins not previously known to localize to SGs. We found that several IDRs were sufficient to mediate SG recruitment. Moreover, the dynamic exchange of IDRs can be observed using fluorescence recovery after photobleaching, whereas other components remain immobile. Lastly, we showed that the IDR of the Ubp3 deubiquitinase was critical for yeast SG formation. This work shows that IDRs can be sufficient for SG incorporation, can remain dynamic in vitrified SGs, and can play an important role in cellular compartmentalization upon stress.This article has an associated First Person interview with the first author of the paper.
Identifiants
pubmed: 32503941
pii: jcs.244657
doi: 10.1242/jcs.244657
pii:
doi:
Substances chimiques
RNA, Messenger
0
Saccharomyces cerevisiae Proteins
0
Endopeptidases
EC 3.4.-
UBP3 protein, S cerevisiae
EC 3.4.99.-
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Informations de copyright
© 2020. Published by The Company of Biologists Ltd.
Déclaration de conflit d'intérêts
Competing interestsThe authors declare no competing or financial interests.