Toward a principled Bayesian workflow in cognitive science.
Journal
Psychological methods
ISSN: 1939-1463
Titre abrégé: Psychol Methods
Pays: United States
ID NLM: 9606928
Informations de publication
Date de publication:
Feb 2021
Feb 2021
Historique:
pubmed:
20
6
2020
medline:
21
10
2021
entrez:
20
6
2020
Statut:
ppublish
Résumé
Experiments in research on memory, language, and in other areas of cognitive science are increasingly being analyzed using Bayesian methods. This has been facilitated by the development of probabilistic programming languages such as Stan, and easily accessible front-end packages such as brms. The utility of Bayesian methods, however, ultimately depends on the relevance of the Bayesian model, in particular whether or not it accurately captures the structure of the data and the data analyst's domain expertise. Even with powerful software, the analyst is responsible for verifying the utility of their model. To demonstrate this point, we introduce a principled Bayesian workflow (Betancourt, 2018) to cognitive science. Using a concrete working example, we describe basic questions one should ask about the model: prior predictive checks, computational faithfulness, model sensitivity, and posterior predictive checks. The running example for demonstrating the workflow is data on reading times with a linguistic manipulation of object versus subject relative clause sentences. This principled Bayesian workflow also demonstrates how to use domain knowledge to inform prior distributions. It provides guidelines and checks for valid data analysis, avoiding overfitting complex models to noise, and capturing relevant data structure in a probabilistic model. Given the increasing use of Bayesian methods, we aim to discuss how these methods can be properly employed to obtain robust answers to scientific questions. All data and code accompanying this article are available from https://osf.io/b2vx9/. (PsycInfo Database Record (c) 2021 APA, all rights reserved).
Identifiants
pubmed: 32551748
pii: 2020-43606-001
doi: 10.1037/met0000275
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
103-126Subventions
Organisme : Deutsche Forschungsgemeinschaft