Segmentation of small ground glass opacity pulmonary nodules based on Markov random field energy and Bayesian probability difference.


Journal

Biomedical engineering online
ISSN: 1475-925X
Titre abrégé: Biomed Eng Online
Pays: England
ID NLM: 101147518

Informations de publication

Date de publication:
17 Jun 2020
Historique:
received: 04 02 2020
accepted: 08 06 2020
entrez: 20 6 2020
pubmed: 20 6 2020
medline: 4 5 2021
Statut: epublish

Résumé

Image segmentation is an important part of computer-aided diagnosis (CAD), the segmentation of small ground glass opacity (GGO) pulmonary nodules is beneficial for the early detection of lung cancer. For the segmentation of small GGO pulmonary nodules, an integrated active contour model based on Markov random field energy and Bayesian probability difference (IACM_MRFEBPD) is proposed in this paper. First, the Markov random field (MRF) is constructed on the computed tomography (CT) images, then the MRF energy is calculated. The MRF energy is used to construct the region term. It can not only enhance the contrast between pulmonary nodule and the background region, but also solve the problem of intensity inhomogeneity using local spatial correlation information between neighboring pixels in the image. Second, the Gaussian mixture model is used to establish the probability model of the image, and the model parameters are estimated by the expectation maximization (EM) algorithm. So the Bayesian posterior probability difference of each pixel can be calculated. The probability difference is used to construct the boundary detection term, which is 0 at the boundary. Therefore, the blurred boundary problem can be solved. Finally, under the framework of the level set, the integrated active contour model is constructed. To verify the effectiveness of the proposed method, the public data of the lung image database consortium and image database resource initiative (LIDC-IDRI) and the clinical data of the Affiliated Jiangmen Hospital of Sun Yat-sen University are used to perform experiments, and the intersection over union (IOU) score is used to evaluate the segmentation methods. Compared with other methods, the proposed method achieves the best results with the highest average IOU of 0.7444, 0.7503, and 0.7450 for LIDC-IDRI test set, clinical test set, and all test sets, respectively. The experiment results show that the proposed method can segment various small GGO pulmonary nodules more accurately and robustly, which is helpful for the accurate evaluation of medical imaging.

Sections du résumé

BACKGROUND BACKGROUND
Image segmentation is an important part of computer-aided diagnosis (CAD), the segmentation of small ground glass opacity (GGO) pulmonary nodules is beneficial for the early detection of lung cancer. For the segmentation of small GGO pulmonary nodules, an integrated active contour model based on Markov random field energy and Bayesian probability difference (IACM_MRFEBPD) is proposed in this paper.
METHODS METHODS
First, the Markov random field (MRF) is constructed on the computed tomography (CT) images, then the MRF energy is calculated. The MRF energy is used to construct the region term. It can not only enhance the contrast between pulmonary nodule and the background region, but also solve the problem of intensity inhomogeneity using local spatial correlation information between neighboring pixels in the image. Second, the Gaussian mixture model is used to establish the probability model of the image, and the model parameters are estimated by the expectation maximization (EM) algorithm. So the Bayesian posterior probability difference of each pixel can be calculated. The probability difference is used to construct the boundary detection term, which is 0 at the boundary. Therefore, the blurred boundary problem can be solved. Finally, under the framework of the level set, the integrated active contour model is constructed.
RESULTS RESULTS
To verify the effectiveness of the proposed method, the public data of the lung image database consortium and image database resource initiative (LIDC-IDRI) and the clinical data of the Affiliated Jiangmen Hospital of Sun Yat-sen University are used to perform experiments, and the intersection over union (IOU) score is used to evaluate the segmentation methods. Compared with other methods, the proposed method achieves the best results with the highest average IOU of 0.7444, 0.7503, and 0.7450 for LIDC-IDRI test set, clinical test set, and all test sets, respectively.
CONCLUSIONS CONCLUSIONS
The experiment results show that the proposed method can segment various small GGO pulmonary nodules more accurately and robustly, which is helpful for the accurate evaluation of medical imaging.

Identifiants

pubmed: 32552724
doi: 10.1186/s12938-020-00793-0
pii: 10.1186/s12938-020-00793-0
pmc: PMC7302391
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

51

Subventions

Organisme : National Natural Science Foundation of China
ID : 61967004
Organisme : National Natural Science Foundation of China
ID : 11901137
Organisme : National Natural Science Foundation of China
ID : 81960324
Organisme : Natural Science Foundation of Guangxi Province
ID : 2018GXNSFBA281023
Organisme : Natural Science Foundation of Guangxi Province
ID : 2016GXNSFBA380160
Organisme : Guangxi Key Laboratory of Automatic Detection Technology and Instrument Foundation
ID : YQ19209
Organisme : Guangxi Key Laboratory of Automatic Detection Technology and Instrument Foundation (CN)
ID : YQ18107
Organisme : Innovation Project of Guet Graduate Education
ID : 2019YCXB03

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Auteurs

Shaorong Zhang (S)

School of Electronic Engineering and Automation, Guilin University of Electronic Technology, Guilin, 541004, China.
School of Electronic Information and Automation, Guilin University of Aerospace Technology, Guilin, 541004, China.

Xiangmeng Chen (X)

The Department of Radiology, The Affiliated Jiangmen Hospital of Sun Yat-sen University, Jiangmen, 529000, China.

Zhibin Zhu (Z)

School of Mathematics and Computational Science, Guilin University of Electronic Technology, Guilin, 541004, China. optimization_zhu@163.com.

Bao Feng (B)

School of Electronic Information and Automation, Guilin University of Aerospace Technology, Guilin, 541004, China.
The Department of Radiology, The Affiliated Jiangmen Hospital of Sun Yat-sen University, Jiangmen, 529000, China.

Yehang Chen (Y)

School of Electronic Engineering and Automation, Guilin University of Electronic Technology, Guilin, 541004, China.

Wansheng Long (W)

The Department of Radiology, The Affiliated Jiangmen Hospital of Sun Yat-sen University, Jiangmen, 529000, China.

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Classifications MeSH