Hereditary disease prediction in eukaryotic DNA: an adaptive signal processing approach.


Journal

Nucleosides, nucleotides & nucleic acids
ISSN: 1532-2335
Titre abrégé: Nucleosides Nucleotides Nucleic Acids
Pays: United States
ID NLM: 100892832

Informations de publication

Date de publication:
2020
Historique:
pubmed: 24 6 2020
medline: 12 1 2021
entrez: 24 6 2020
Statut: ppublish

Résumé

Hereditary disease prediction in eukaryotic DNA using signal processing approaches is an incredible work in bioinformatics. Researchers of various fields are trying to put forth a noninvasive approach to forecast the disease-related genes. As diseased genes are more random than the healthy ones, in this work, a comparison of the diseased gene is made against the healthy ones. An adaptive signal processing method like functional link artificial neural network-based Levenberg-Marquardt filter has been proposed in this regard. For parameter upgradation, the algorithm is modified using particle swarm optimization. Here, disease genes are discriminated from healthy ones based on the magnitude of mean square error (MSE), which is calculated through the adaptive filter. The performance of the algorithm is inspected by computing some evaluation parameters. Since accuracy is the prime concern, authors in this work have taken an attempt to improve the accuracy level compared to the existing methods. Taking the reference gene as healthy, the overall process is accomplished by categorizing the diseased and healthy targets with MSE value at a threshold of 0.012. The proposed technique predicts the test gene sets successfully.

Identifiants

pubmed: 32571139
doi: 10.1080/15257770.2020.1780440
doi:

Substances chimiques

DNA 9007-49-2

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1179-1199

Auteurs

Lopamudra Das (L)

School of Electronics Engineering, KIIT University, Bhubaneswar, Odisha, India.

Sarita Nanda (S)

School of Electronics Engineering, KIIT University, Bhubaneswar, Odisha, India.

J K Das (JK)

School of Electronics Engineering, KIIT University, Bhubaneswar, Odisha, India.

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Classifications MeSH