Structural and dynamic asymmetry in icosahedrally symmetric virus capsids.
Journal
Current opinion in virology
ISSN: 1879-6265
Titre abrégé: Curr Opin Virol
Pays: Netherlands
ID NLM: 101560941
Informations de publication
Date de publication:
12 2020
12 2020
Historique:
received:
12
02
2020
revised:
30
05
2020
accepted:
04
06
2020
pubmed:
3
7
2020
medline:
26
8
2021
entrez:
3
7
2020
Statut:
ppublish
Résumé
A common characteristic of virus capsids is icosahedral symmetry, yet these highly symmetric structures can display asymmetric features within their virions and undergo asymmetric dynamics. The fields of structural and computational biology have entered a new realm in the investigation of virus infection mechanisms, with the ability to observe symmetry-breaking features. This review will cover important studies on icosahedral virus structure and dynamics, covering both symmetric and asymmetric conformational changes. However, the main emphasis of the review will be towards recent studies employing cryo-electron microscopy or molecular dynamics simulations, which can uncover asymmetric aspects of these systems relevant to understanding viral physical-chemical properties and their biological impact.
Identifiants
pubmed: 32615360
pii: S1879-6257(20)30034-1
doi: 10.1016/j.coviro.2020.06.002
pmc: PMC7746594
mid: NIHMS1604086
pii:
doi:
Substances chimiques
Capsid Proteins
0
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Review
Langues
eng
Sous-ensembles de citation
IM
Pagination
8-16Subventions
Organisme : NIGMS NIH HHS
ID : R35 GM119762
Pays : United States
Informations de copyright
Copyright © 2020 Elsevier B.V. All rights reserved.
Références
Microbiol Mol Biol Rev. 1999 Dec;63(4):862-922, table of contents
pubmed: 10585969
J Chem Phys. 2014 Oct 28;141(16):165101
pubmed: 25362342
Proc Natl Acad Sci U S A. 2016 Oct 11;113(41):11519-11524
pubmed: 27671640
J Mol Biol. 2004 Jul 9;340(3):419-33
pubmed: 15210344
J Mol Biol. 1995 Oct 13;253(1):86-99
pubmed: 7473720
J Virol. 2006 Jan;80(2):615-22
pubmed: 16378964
J Virol. 2009 Jul;83(13):6929-33
pubmed: 19369344
Trends Microbiol. 2018 Jun;26(6):525-537
pubmed: 29079499
Biophys J. 2012 Feb 8;102(3):606-12
pubmed: 22325284
Virology. 2015 May;479-480:578-90
pubmed: 25728300
J Phys Chem Lett. 2017 Feb 16;8(4):779-784
pubmed: 28129688
J Struct Biol. 2018 Jan;201(1):1-4
pubmed: 29080674
PLoS Comput Biol. 2012;8(5):e1002502
pubmed: 22589708
Structure. 2006 Mar;14(3):437-49
pubmed: 16531228
J Virol. 2014 Feb;88(3):1758-70
pubmed: 24257617
Nature. 1956 Mar 10;177(4506):473-5
pubmed: 13309339
Science. 2018 Apr 6;360(6384):
pubmed: 29622628
Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5271-6
pubmed: 22440750
Virology. 2015 May;479-480:487-97
pubmed: 25864106
Biophys Rev. 2019 Aug;11(4):603-609
pubmed: 31342264
Nature. 1978 Nov 23;276(5686):368-73
pubmed: 19711552
Biochim Biophys Acta Biomembr. 2020 Feb 1;1862(2):183102
pubmed: 31678020
Curr Opin Virol. 2018 Aug;31:82-91
pubmed: 30181049
Annu Rev Phys Chem. 2015 Apr;66:217-39
pubmed: 25532951
J Virol. 2009 Sep;83(17):8628-37
pubmed: 19553341
Nat Commun. 2016 Aug 26;7:12524
pubmed: 27561669
J Mol Biol. 1993 Dec 5;234(3):620-39
pubmed: 8254664
Science. 2000 Sep 22;289(5487):2129-33
pubmed: 11000116
J Biol Phys. 2018 Jun;44(2):195-209
pubmed: 29644513
Cold Spring Harb Symp Quant Biol. 1962;27:1-24
pubmed: 14019094
PLoS One. 2013 Jun 13;8(6):e63640
pubmed: 23785395
Environ Sci Technol. 2016 Dec 20;50(24):13520-13528
pubmed: 27709908
J Virol. 2018 Sep 26;92(20):
pubmed: 30089690
Biophys J. 2009 Feb 18;96(4):1350-63
pubmed: 19217853
Nature. 2009 Apr 2;458(7238):646-50
pubmed: 19204733
Curr Top Microbiol Immunol. 2010;343:1-22
pubmed: 20407886
J Mol Biol. 2005 Jan 14;345(2):299-314
pubmed: 15571723
Nature. 2017 Jan 5;541(7635):112-116
pubmed: 27992877
Nature. 2019 Jan;565(7739):377-381
pubmed: 30626974
Biochim Biophys Acta Biomembr. 2017 Jul;1859(7):1190-1199
pubmed: 28395954
EMBO J. 2005 Apr 6;24(7):1352-63
pubmed: 15775971
Nucleic Acids Res. 2009 Jan;37(Database issue):D436-42
pubmed: 18981051
J Virol. 2017 Jan 18;91(3):
pubmed: 27852863
J Mol Biol. 2013 Sep 9;425(17):3235-49
pubmed: 23763992
J Phys Chem Lett. 2016 May 19;7(10):1836-44
pubmed: 27128262
J Virol. 2013 Apr;87(7):3903-14
pubmed: 23365424
Nature. 1980 Jul 3;286(5768):33-9
pubmed: 19711553
J Virol. 2019 Oct 29;93(22):
pubmed: 31484752
J Am Chem Soc. 2014 Feb 26;136(8):3097-107
pubmed: 24495192
Structure. 2008 Oct 8;16(10):1491-502
pubmed: 18940605
Structure. 2006 Nov;14(11):1655-65
pubmed: 17098191
Curr Opin Virol. 2019 Jun;36:67-73
pubmed: 31255982
Biophys J. 2013 Oct 15;105(8):1893-903
pubmed: 24138865
Nat Commun. 2013;4:1929
pubmed: 23728514
PLoS Biol. 2018 Jun 20;16(6):e2006191
pubmed: 29924793
Biophys J. 2010 Aug 9;99(4):1175-81
pubmed: 20713001
J Chem Theory Comput. 2012 Jul 10;8(7):2474-83
pubmed: 26588976
Elife. 2018 Apr 27;7:
pubmed: 29708495
J Virol. 2005 Jun;79(12):7745-55
pubmed: 15919927
J Mol Biol. 2003 Dec 12;334(5):885-99
pubmed: 14643655
J Virol. 2010 May;84(9):4426-41
pubmed: 20181687
Biophys J. 2005 Jul;89(1):141-57
pubmed: 15863480
Front Bioeng Biotechnol. 2015 Jul 30;3:103
pubmed: 26284238
Sci Adv. 2016 Aug 24;2(8):e1501929
pubmed: 27574701
Structure. 2013 Jul 2;21(7):1225-34
pubmed: 23810697
Chem Biol. 1999 Jul;6(7):473-81
pubmed: 10381406
Biophys J. 2000 Feb;78(2):839-45
pubmed: 10653796
Adv Virus Res. 2019;105:73-91
pubmed: 31522709
Annu Rev Biophys. 2012;41:473-96
pubmed: 22404678
PLoS Comput Biol. 2018 Apr 16;14(4):e1006082
pubmed: 29659564
Cell. 2000 Jan 21;100(2):253-63
pubmed: 10660048