Co-circulation of both low and highly pathogenic avian influenza H5 viruses in current poultry epidemics in Taiwan.
evolution
influenza virus
pandemic
zoonotic
Journal
Virus evolution
ISSN: 2057-1577
Titre abrégé: Virus Evol
Pays: England
ID NLM: 101664675
Informations de publication
Date de publication:
Jan 2020
Jan 2020
Historique:
entrez:
15
7
2020
pubmed:
15
7
2020
medline:
15
7
2020
Statut:
epublish
Résumé
Highly pathogenic avian influenza (HPAI) A(H5) viruses belonging to clade 2.3.4.4c of the A/goose/Guangdong/1/96-like (Gs/GD) lineage caused severe global outbreaks in domestic birds from 2014 to 2015, that also represented the first incursions of Gs/GD viruses into Taiwan and the USA. However, few studies have investigated the circulation of clade 2.3.4.4c viruses after 2015. Here, we describe Gs/GD clade 2.3.4.4c and Mexican-like H5N2 viruses that were isolated in Taiwan during active surveillance conducted in chicken farms from February to March 2019. Phylogenetic analysis demonstrated two distinct genome constellations of the clade 2.3.4.4c H5 viruses, with the internal genes of one of the new genotypes closely related to a virus isolated from a pintail (
Identifiants
pubmed: 32661493
doi: 10.1093/ve/veaa037
pii: veaa037
pmc: PMC7326300
doi:
Types de publication
Journal Article
Langues
eng
Pagination
veaa037Informations de copyright
© The Author(s) 2020. Published by Oxford University Press.
Références
Virus Evol. 2018 Jun 08;4(1):vey016
pubmed: 29942656
Syst Biol. 2018 Sep 1;67(5):901-904
pubmed: 29718447
Rev Med Virol. 2015 Nov;25(6):388-405
pubmed: 26458727
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
J Virol. 2009 Oct;83(19):10309-13
pubmed: 19605485
Vet Microbiol. 2016 May 1;187:50-57
pubmed: 27066708
Virus Res. 2013 Dec 5;178(1):63-77
pubmed: 23735535
Science. 2019 Jan 4;363(6422):74-77
pubmed: 30606844
Infect Genet Evol. 2018 Aug;62:275-278
pubmed: 29705362
J Virol. 2014 May;88(10):5677-86
pubmed: 24623422
J Vet Med Sci. 2011 Jun;73(6):767-72
pubmed: 21301183
Emerg Infect Dis. 2018 Jun;24(6):1147-1149
pubmed: 29774853
Infect Genet Evol. 2016 Mar;38:96-100
pubmed: 26690663
Emerg Infect Dis. 2015 May;21(5):872-4
pubmed: 25897965
PLoS Biol. 2006 May;4(5):e88
pubmed: 16683862
Emerg Infect Dis. 2014 Jun;20(6):1087-9
pubmed: 24856098
J Vet Med Sci. 2017 Jan 20;79(1):108-114
pubmed: 27725416
Mol Biol Evol. 2013 Mar;30(3):713-24
pubmed: 23180580
Avian Dis. 2010 Mar;54(1):109-14
pubmed: 20408408
Nat Protoc. 2017 Jun;12(6):1261-1276
pubmed: 28538739
Emerg Infect Dis. 2015 May;21(5):886-90
pubmed: 25898265
Mol Biol Evol. 2018 Dec 1;35(12):3041-3043
pubmed: 30351396
Influenza Other Respir Viruses. 2015 Sep;9(5):271-6
pubmed: 25966311
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
Nature. 2016 Feb 11;530(7589):228-232
pubmed: 26840485
Virus Evol. 2016 Apr 09;2(1):vew007
pubmed: 27774300
Clin Infect Dis. 2002 May 1;34 Suppl 2:S58-64
pubmed: 11938498
Proc Natl Acad Sci U S A. 2006 Feb 21;103(8):2845-50
pubmed: 16473931
J Vet Med Sci. 2016 Sep 1;78(8):1223-8
pubmed: 27086860
PLoS Comput Biol. 2009 Sep;5(9):e1000520
pubmed: 19779555
Arch Virol. 2015 Jul;160(7):1629-43
pubmed: 25902725
Mol Ecol Resour. 2011 May;11(3):423-34
pubmed: 21481200