Discovery of Novel Tankyrase Inhibitors through Molecular Docking-Based Virtual Screening and Molecular Dynamics Simulation Studies.


Journal

Molecules (Basel, Switzerland)
ISSN: 1420-3049
Titre abrégé: Molecules
Pays: Switzerland
ID NLM: 100964009

Informations de publication

Date de publication:
11 Jul 2020
Historique:
received: 09 06 2020
revised: 28 06 2020
accepted: 07 07 2020
entrez: 16 7 2020
pubmed: 16 7 2020
medline: 24 2 2021
Statut: epublish

Résumé

Tankyrase enzymes (TNKS), a core part of the canonical Wnt pathway, are a promising target in the search for potential anti-cancer agents. Although several hundreds of the TNKS inhibitors are currently known, identification of their novel chemotypes attracts considerable interest. In this study, the molecular docking and machine learning-based virtual screening techniques combined with the physico-chemical and ADMET (absorption, distribution, metabolism, excretion, toxicity) profile prediction and molecular dynamics simulations were applied to a subset of the ZINC database containing about 1.7 M commercially available compounds. Out of seven candidate compounds biologically evaluated in vitro for their inhibition of the TNKS2 enzyme using immunochemical assay, two compounds have shown a decent level of inhibitory activity with the IC

Identifiants

pubmed: 32664504
pii: molecules25143171
doi: 10.3390/molecules25143171
pmc: PMC7397142
pii:
doi:

Substances chimiques

Enzyme Inhibitors 0
TNKS2 protein, human EC 2.4.2.30
Tankyrases EC 2.4.2.30

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Russian Foundation for Basic Research
ID : 18-515-80028
Organisme : Department of Science and Technology, Ministry of Science and Technology, India
ID : DST/IMRCD/BRICS/PilotCall2/CCT/2018-G
Organisme : National Research Foundation of South Africa
ID : 116014
Organisme : BRICS STI
ID : BRICS2017-236

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Auteurs

Vladimir P Berishvili (VP)

Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.

Alexander N Kuimov (AN)

A.N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.

Andrew E Voronkov (AE)

Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Digital BioPharm Ltd., Hovseterveien 42 A, H0301, 0768 Oslo, Norway.

Eugene V Radchenko (EV)

Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.

Pradeep Kumar (P)

Wits Advanced Drug Delivery Platform Research Unit, Department of Pharmacy and Pharmacology, School of Therapeutic Sciences, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, 7 York Road, Parktown 2193, South Africa.

Yahya E Choonara (YE)

Wits Advanced Drug Delivery Platform Research Unit, Department of Pharmacy and Pharmacology, School of Therapeutic Sciences, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, 7 York Road, Parktown 2193, South Africa.

Viness Pillay (V)

Wits Advanced Drug Delivery Platform Research Unit, Department of Pharmacy and Pharmacology, School of Therapeutic Sciences, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, 7 York Road, Parktown 2193, South Africa.

Ahmed Kamal (A)

School of Pharmaceutical Education and Research, Jamia Hamdard, New Delhi 110 062, India.

Vladimir A Palyulin (VA)

Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.

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Classifications MeSH