A regionally scalable habitat typology for assessing benthic habitats and fish communities: Application to New Caledonia reefs and lagoons.

Coral Sea Marine Park data mining habitat prediction habitat typology in situ monitoring marine protected areas scaling up supervised classification rules underwater video

Journal

Ecology and evolution
ISSN: 2045-7758
Titre abrégé: Ecol Evol
Pays: England
ID NLM: 101566408

Informations de publication

Date de publication:
Jul 2020
Historique:
received: 08 04 2020
revised: 24 04 2020
accepted: 02 05 2020
entrez: 8 8 2020
pubmed: 8 8 2020
medline: 8 8 2020
Statut: epublish

Résumé

Scalable assessments of biodiversity are required to successfully and adaptively manage coastal ecosystems. Assessments must account for habitat variations at multiple spatial scales, including the small scales (<100 m) at which biotic and abiotic habitat components structure the distribution of fauna, including fishes. Associated challenges include achieving consistent habitat descriptions and upscaling from in situ-monitored stations to larger scales. We developed a methodology for (a) determining habitat types consistent across scales within large management units, (b) characterizing heterogeneities within each habitat, and (c) predicting habitat from new survey data. It relies on clustering techniques and supervised classification rules and was applied to a set of 3,145 underwater video observations of fish and benthic habitats collected in all reef and lagoon habitats around New Caledonia. A baseline habitat typology was established with five habitat types clearly characterized by abiotic and biotic attributes. In a complex mosaic of habitats, habitat type is an indispensable covariate for explaining spatial variations in fish communities. Habitat types were further described by 26 rules capturing the range of habitat features encountered. Rules provided intuitive habitat descriptions and predicted habitat type for new monitoring observations, both straightforwardly and with known confidence. Images are convenient for interacting with managers and stakeholders. Our scheme is (a) consistent at the scale of New Caledonia reefs and lagoons (1.4 million km

Identifiants

pubmed: 32760509
doi: 10.1002/ece3.6405
pii: ECE36405
pmc: PMC7391553
doi:

Types de publication

Journal Article

Langues

eng

Pagination

7021-7049

Informations de copyright

© 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

Déclaration de conflit d'intérêts

None declared.

Références

Mar Environ Res. 2018 Sep;140:210-220
pubmed: 30251645
Ecol Evol. 2016 Aug 29;6(18):6648-6661
pubmed: 27777737
Ecol Appl. 2012 Apr;22(3):792-803
pubmed: 22645811
Trends Ecol Evol. 2008 Oct;23(10):555-63
pubmed: 18722687
PLoS One. 2016 Jun 22;11(6):e0155634
pubmed: 27333202
PLoS One. 2015 Oct 28;10(10):e0141039
pubmed: 26509918
PLoS One. 2012;7(2):e30536
pubmed: 22383965
PLoS One. 2018 Aug 13;13(8):e0202206
pubmed: 30102715

Auteurs

Dominique Pelletier (D)

Ifremer LEAD Nouméa Nouvelle-Calédonie France.
Ifremer EMH Nantes France.

Nazha Selmaoui-Folcher (N)

Université de la Nouvelle-Calédonie ISEA Nouméa Nouvelle-Calédonie France.

Thomas Bockel (T)

Ifremer LEAD Nouméa Nouvelle-Calédonie France.

Thomas Schohn (T)

Ifremer LEAD Nouméa Nouvelle-Calédonie France.

Classifications MeSH