Deep Learning-Based Segmentation and Quantification of Retinal Capillary Non-Perfusion on Ultra-Wide-Field Retinal Fluorescein Angiography.

fluorescein angiography image segmentation retinal non-perfusion

Journal

Journal of clinical medicine
ISSN: 2077-0383
Titre abrégé: J Clin Med
Pays: Switzerland
ID NLM: 101606588

Informations de publication

Date de publication:
06 Aug 2020
Historique:
received: 03 07 2020
revised: 28 07 2020
accepted: 04 08 2020
entrez: 13 8 2020
pubmed: 13 8 2020
medline: 13 8 2020
Statut: epublish

Résumé

Reliable outcome measures are required for clinical trials investigating novel agents for preventing progression of capillary non-perfusion (CNP) in retinal vascular diseases. Currently, accurate quantification of topographical distribution of CNP on ultrawide field fluorescein angiography (UWF-FA) by retinal experts is subjective and lack standardisation. A U-net style network was trained to extract a dense segmentation of CNP from a newly created dataset of 75 UWF-FA images. A subset of 20 images was also segmented by a second expert grader for inter-grader reliability evaluation. Further, a circular grid centred on the FAZ was used to provide standardised CNP distribution analysis. The model for dense segmentation was five-fold cross-validated achieving area under the receiving operating characteristic of 0.82 (0.03) and area under precision-recall curve 0.73 (0.05). Inter-grader assessment on the 20 image subset achieves: precision 59.34 (10.92), recall 76.99 (12.5), and dice similarity coefficient (DSC) 65.51 (4.91), and the centred operating point of the automated model reached: precision 64.41 (13.66), recall 70.02 (16.2), and DSC 66.09 (13.32). Agreement of CNP grid assessment reached: Kappa 0.55 (0.03), perfused intraclass correlation (ICC) 0.89 (0.77, 0.93), non-perfused ICC 0.86 (0.73, 0.92), inter-grader agreement of CNP grid assessment values are Kappa 0.43 (0.03), perfused ICC 0.70 (0.48, 0.83), non-perfused ICC 0.71 (0.48, 0.83). Automated dense segmentation of CNP in UWF-FA images achieves performance levels comparable to inter-grader agreement values. A grid placed on the deep learning-based automatic segmentation of CNP generates a reliable and quantifiable method of measurement of CNP, to overcome the subjectivity of human graders.

Identifiants

pubmed: 32781564
pii: jcm9082537
doi: 10.3390/jcm9082537
pmc: PMC7464218
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Medical Research Council
ID : MR/P027881/1
Pays : United Kingdom

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Auteurs

Joan M Nunez do Rio (JM)

Institute of Ophthalmology, University College London, London EC1V 9EL, UK.

Piyali Sen (P)

Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
NIHR Moorfields Biomedical Research Centre, Moorfields Eye Hospital, London EC1V 2PD, UK.

Rajna Rasheed (R)

Institute of Ophthalmology, University College London, London EC1V 9EL, UK.

Akanksha Bagchi (A)

NIHR Moorfields Biomedical Research Centre, Moorfields Eye Hospital, London EC1V 2PD, UK.

Luke Nicholson (L)

Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
NIHR Moorfields Biomedical Research Centre, Moorfields Eye Hospital, London EC1V 2PD, UK.

Adam M Dubis (AM)

Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
NIHR Moorfields Biomedical Research Centre, Moorfields Eye Hospital, London EC1V 2PD, UK.

Christos Bergeles (C)

King's College London, School of Biomedical Engineering & Imaging Sciences, London SE1 7EU, UK.

Sobha Sivaprasad (S)

Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
NIHR Moorfields Biomedical Research Centre, Moorfields Eye Hospital, London EC1V 2PD, UK.

Classifications MeSH