Quantification of Myocardial Blood Flow by Machine Learning Analysis of Modified Dual Bolus MRI Examination.

Machine learning Magnetic resonance imaging Modified dual bolus method Myocardial perfusion imaging Random forest Support vector machine

Journal

Annals of biomedical engineering
ISSN: 1573-9686
Titre abrégé: Ann Biomed Eng
Pays: United States
ID NLM: 0361512

Informations de publication

Date de publication:
Feb 2021
Historique:
received: 31 03 2020
accepted: 11 08 2020
pubmed: 21 8 2020
medline: 6 10 2021
entrez: 22 8 2020
Statut: ppublish

Résumé

Contrast-enhanced magnetic resonance imaging (MRI) is a promising method for estimating myocardial blood flow (MBF). However, it is often affected by noise from imaging artefacts, such as dark rim artefact obscuring relevant features. Machine learning enables extracting important features from such noisy data and is increasingly applied in areas where traditional approaches are limited. In this study, we investigate the capacity of machine learning, particularly support vector machines (SVM) and random forests (RF), for estimating MBF from tissue impulse response signal in an animal model. Domestic pigs (n = 5) were subjected to contrast enhanced first pass MRI (MRI-FP) and the impulse response at different regions of the myocardium (n = 24/pig) were evaluated at rest (n = 120) and stress (n = 96). Reference MBF was then measured using positron emission tomography (PET). Since the impulse response may include artefacts, classification models based on SVM and RF were developed to discriminate noisy signal. In addition, regression models based on SVM, RF and linear regression (for comparison) were developed for estimating MBF from the impulse response at rest and stress. The classification and regression models were trained on data from 4 pigs (n = 168) and tested on 1 pig (n = 48). Models based on SVM and RF outperformed linear regression, with higher correlation (R

Identifiants

pubmed: 32820382
doi: 10.1007/s10439-020-02591-0
pii: 10.1007/s10439-020-02591-0
pmc: PMC7851105
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

653-662

Subventions

Organisme : Kuopion Yliopistollinen Sairaala
ID : VTR n:o 5063530
Organisme : Academy of Finland
ID : #285909
Organisme : Academy of Finland
ID : # 271961

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Auteurs

Minna Husso (M)

Diagnostic Imaging Center, Kuopio University Hospital, PO Box 100, 70029 KYS, Kuopio, Finland. minna.husso@kuh.fi.

Isaac O Afara (IO)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
School of Information Technology and Electrical Engineering, The University of Queensland, Brisbane, Australia.

Mikko J Nissi (MJ)

Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.

Antti Kuivanen (A)

A.I. Virtanen Institute for Molecule Sciences, University of Eastern Finland, Kuopio, Finland.

Paavo Halonen (P)

A.I. Virtanen Institute for Molecule Sciences, University of Eastern Finland, Kuopio, Finland.

Miikka Tarkia (M)

Turku PET Centre, University Hospital and University of Turku, Turku, Finland.

Jarmo Teuho (J)

Turku PET Centre, University Hospital and University of Turku, Turku, Finland.

Virva Saunavaara (V)

Turku PET Centre, University Hospital and University of Turku, Turku, Finland.
Department of Medical Physics, Turku University Hospital, Turku, Finland.

Pauli Vainio (P)

Diagnostic Imaging Center, Kuopio University Hospital, PO Box 100, 70029 KYS, Kuopio, Finland.

Petri Sipola (P)

Diagnostic Imaging Center, Kuopio University Hospital, PO Box 100, 70029 KYS, Kuopio, Finland.

Hannu Manninen (H)

Diagnostic Imaging Center, Kuopio University Hospital, PO Box 100, 70029 KYS, Kuopio, Finland.

Seppo Ylä-Herttuala (S)

A.I. Virtanen Institute for Molecule Sciences, University of Eastern Finland, Kuopio, Finland.
Heart Center and Gene Therapy Unit, Kuopio University Hospital, Kuopio, Finland.

Juhani Knuuti (J)

Turku PET Centre, University Hospital and University of Turku, Turku, Finland.

Juha Töyräs (J)

Diagnostic Imaging Center, Kuopio University Hospital, PO Box 100, 70029 KYS, Kuopio, Finland.
Department of Applied Physics, University of Eastern Finland, Kuopio, Finland.
School of Information Technology and Electrical Engineering, The University of Queensland, Brisbane, Australia.

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Classifications MeSH