The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera.
Plecoptera
COI
DNA barcode
continental Portugal
continental Spain
occurrence records
species distributions
Journal
Biodiversity data journal
ISSN: 1314-2828
Titre abrégé: Biodivers Data J
Pays: Bulgaria
ID NLM: 101619899
Informations de publication
Date de publication:
2020
2020
Historique:
received:
05
06
2020
accepted:
03
07
2020
entrez:
22
8
2020
pubmed:
22
8
2020
medline:
22
8
2020
Statut:
epublish
Résumé
The use of DNA barcoding allows unprecedented advances in biodiversity assessments and monitoring schemes of freshwater ecosystems; nevertheless, it requires the construction of comprehensive reference collections of DNA sequences that represent the existing biodiversity. Plecoptera are considered particularly good ecological indicators and one of the most endangered groups of insects, but very limited information on their DNA barcodes is available in public databases. Currently, less than 50% of the Iberian species are represented in BOLD. The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera dataset contains records of 71 specimens of Plecoptera. All specimens have been morphologically identified to species level and belong to 29 species in total. This dataset contributes to the knowledge on the DNA barcodes and distribution of Plecoptera from the Iberian Peninsula and it is one of the IBI database public releases that makes available genetic and distribution data for a series of taxa.The species represented in this dataset correspond to an addition to public databases of 17 species and 21 BINs. Fifty-eight specimens were collected in Portugal and 18 in Spain during the period of 2004 to 2018. All specimens are deposited in the IBI collection at CIBIO, Research Center in Biodiversity and Genetic Resources and their DNA barcodes are publicly available in the Barcode of Life Data System (BOLD) online database. The distribution dataset can be freely accessed through the Global Biodiversity Information Facility (GBIF).
Sections du résumé
BACKGROUND
BACKGROUND
The use of DNA barcoding allows unprecedented advances in biodiversity assessments and monitoring schemes of freshwater ecosystems; nevertheless, it requires the construction of comprehensive reference collections of DNA sequences that represent the existing biodiversity. Plecoptera are considered particularly good ecological indicators and one of the most endangered groups of insects, but very limited information on their DNA barcodes is available in public databases. Currently, less than 50% of the Iberian species are represented in BOLD.
NEW INFORMATION
CONCLUSIONS
The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera dataset contains records of 71 specimens of Plecoptera. All specimens have been morphologically identified to species level and belong to 29 species in total. This dataset contributes to the knowledge on the DNA barcodes and distribution of Plecoptera from the Iberian Peninsula and it is one of the IBI database public releases that makes available genetic and distribution data for a series of taxa.The species represented in this dataset correspond to an addition to public databases of 17 species and 21 BINs. Fifty-eight specimens were collected in Portugal and 18 in Spain during the period of 2004 to 2018. All specimens are deposited in the IBI collection at CIBIO, Research Center in Biodiversity and Genetic Resources and their DNA barcodes are publicly available in the Barcode of Life Data System (BOLD) online database. The distribution dataset can be freely accessed through the Global Biodiversity Information Facility (GBIF).
Identifiants
pubmed: 32821214
doi: 10.3897/BDJ.8.e55137
pii: 55137
pmc: PMC7403161
doi:
Types de publication
Journal Article
Langues
eng
Pagination
e55137Informations de copyright
Sonia Ferreira, José Manuel Tierno de Figueroa, Filipa MS Martins, Joana Verissimo, Lorenzo Quaglietta, José Manuel Grosso-Silva, Pedro B Lopes, Pedro Sousa, Joana Paupério, Nuno A Fonseca, Pedro Beja.
Références
Zootaxa. 2019 May 24;4609(3):zootaxa.4609.3.10
pubmed: 31717100
Proc Biol Sci. 2003 Feb 7;270(1512):313-21
pubmed: 12614582
Mol Ecol Resour. 2017 Nov;17(6):1293-1307
pubmed: 28449274
Annu Rev Entomol. 2000;45:709-46
pubmed: 10761594
Sci Total Environ. 2019 Aug 15;678:499-524
pubmed: 31077928
Mol Ecol Resour. 2014 Jul;14(4):706-15
pubmed: 24479435
Sci Total Environ. 2018 Oct 1;637-638:1295-1310
pubmed: 29801222
Genome. 2016 Sep;59(9):661-70
pubmed: 27314158
Insects. 2019 Apr 06;10(4):
pubmed: 30959938
Sci Rep. 2015 Apr 17;5:9687
pubmed: 25884109
Proc Natl Acad Sci U S A. 2005 Jun 7;102(23):8369-74
pubmed: 15928076
Mol Mar Biol Biotechnol. 1994 Oct;3(5):294-9
pubmed: 7881515