Filamentous active matter: Band formation, bending, buckling, and defects.


Journal

Science advances
ISSN: 2375-2548
Titre abrégé: Sci Adv
Pays: United States
ID NLM: 101653440

Informations de publication

Date de publication:
Jul 2020
Historique:
received: 13 02 2019
accepted: 05 06 2020
entrez: 25 8 2020
pubmed: 25 8 2020
medline: 25 8 2020
Statut: epublish

Résumé

Motor proteins drive persistent motion and self-organization of cytoskeletal filaments. However, state-of-the-art microscopy techniques and continuum modeling approaches focus on large length and time scales. Here, we perform component-based computer simulations of polar filaments and molecular motors linking microscopic interactions and activity to self-organization and dynamics from the filament level up to the mesoscopic domain level. Dynamic filament cross-linking and sliding and excluded-volume interactions promote formation of bundles at small densities and of active polar nematics at high densities. A buckling-type instability sets the size of polar domains and the density of topological defects. We predict a universal scaling of the active diffusion coefficient and the domain size with activity, and its dependence on parameters like motor concentration and filament persistence length. Our results provide a microscopic understanding of cytoplasmic streaming in cells and help to develop design strategies for novel engineered active materials.

Identifiants

pubmed: 32832652
doi: 10.1126/sciadv.aaw9975
pii: aaw9975
pmc: PMC7439626
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

eaaw9975

Informations de copyright

Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC).

Références

Soft Matter. 2018 Dec 19;15(1):94-101
pubmed: 30520495
J Chem Phys. 2017 Oct 7;147(13):134908
pubmed: 28987092
Phys Rev Lett. 2015 Jan 30;114(4):048101
pubmed: 25679909
Nat Commun. 2018 Aug 21;9(1):3246
pubmed: 30131558
Soft Matter. 2016 Mar 14;12(10):2676-87
pubmed: 26742483
Nat Commun. 2013;4:3013
pubmed: 24346733
Soft Matter. 2015 Sep 28;11(36):7181-90
pubmed: 26256415
Phys Rev E. 2018 Feb;97(2-1):022412
pubmed: 29548141
Phys Rev E Stat Nonlin Soft Matter Phys. 2015;92(6):062709
pubmed: 26764729
Biophys J. 2017 Sep 5;113(5):1121-1132
pubmed: 28877494
Rep Prog Phys. 2015 May;78(5):056601
pubmed: 25919479
Langmuir. 2011 Aug 16;27(16):10061-71
pubmed: 21707043
Philos Trans A Math Phys Eng Sci. 2014 Nov 28;372(2029):
pubmed: 25332389
Eur Phys J E Soft Matter. 2004 May;14(1):17-34
pubmed: 15221587
Philos Trans A Math Phys Eng Sci. 2014 Nov 28;372(2029):
pubmed: 25332391
Nat Commun. 2016 Jun 02;7:11814
pubmed: 27251117
Philos Trans A Math Phys Eng Sci. 2014 Nov 28;372(2029):
pubmed: 25332382
Nat Phys. 2019 Dec;15(12):1295-1300
pubmed: 32322291
Nat Commun. 2016 Feb 03;7:10557
pubmed: 26837846
Proc Natl Acad Sci U S A. 2016 Aug 23;113(34):E4995-5004
pubmed: 27512034
Science. 2014 Sep 5;345(6201):1135-9
pubmed: 25190790
Nature. 2012 Nov 15;491(7424):431-4
pubmed: 23135402
Nat Commun. 2017 Sep 15;8(1):564
pubmed: 28916801
Nature. 2010 Jan 28;463(7280):485-92
pubmed: 20110992
Phys Rev Lett. 2008 May 2;100(17):178103
pubmed: 18518342
Soft Matter. 2016 Sep 28;12(38):7943-7952
pubmed: 27722646
BMC Biophys. 2011 Nov 16;4:18
pubmed: 22087580
Phys Rev Lett. 2013 Sep 13;111(11):118101
pubmed: 24074119
Nat Mater. 2015 Nov;14(11):1110-5
pubmed: 26280224
Sci Adv. 2018 Oct 12;4(10):eaat7779
pubmed: 30333990
Phys Rev Lett. 2002 Jul 29;89(5):058101
pubmed: 12144468
Phys Rev Lett. 2007 Jul 27;99(4):048102
pubmed: 17678409
Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 2000 Jun;61(6 Pt B):6898-908
pubmed: 11088382
Soft Matter. 2016 May 7;12(17):3854-9
pubmed: 26983376
Science. 2007 Jul 6;317(5834):105-8
pubmed: 17615353

Auteurs

Gerard A Vliegenthart (GA)

Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany.

Arvind Ravichandran (A)

Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany.

Marisol Ripoll (M)

Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany.

Thorsten Auth (T)

Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany.

Gerhard Gompper (G)

Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany.

Classifications MeSH