Ontario Neurodegenerative Disease Research Initiative (ONDRI): Structural MRI Methods and Outcome Measures.

Alzheimer MRI Parkinson amyotrophic lateral sclerosis cerebral small vessel disease cerebrovascular disease frontotemporal dementia stroke

Journal

Frontiers in neurology
ISSN: 1664-2295
Titre abrégé: Front Neurol
Pays: Switzerland
ID NLM: 101546899

Informations de publication

Date de publication:
2020
Historique:
received: 06 01 2020
accepted: 07 07 2020
entrez: 28 8 2020
pubmed: 28 8 2020
medline: 28 8 2020
Statut: epublish

Résumé

The Ontario Neurodegenerative Research Initiative (ONDRI) is a 3 years multi-site prospective cohort study that has acquired comprehensive multiple assessment platform data, including 3T structural MRI, from neurodegenerative patients with Alzheimer's disease, mild cognitive impairment, Parkinson's disease, amyotrophic lateral sclerosis, frontotemporal dementia, and cerebrovascular disease. This heterogeneous cross-section of patients with complex neurodegenerative and neurovascular pathologies pose significant challenges for standard neuroimaging tools. To effectively quantify regional measures of normal and pathological brain tissue volumes, the ONDRI neuroimaging platform implemented a semi-automated MRI processing pipeline that was able to address many of the challenges resulting from this heterogeneity. The purpose of this paper is to serve as a reference and conceptual overview of the comprehensive neuroimaging pipeline used to generate regional brain tissue volumes and neurovascular marker data that will be made publicly available online.

Identifiants

pubmed: 32849254
doi: 10.3389/fneur.2020.00847
pmc: PMC7431907
doi:

Types de publication

Journal Article

Langues

eng

Pagination

847

Informations de copyright

Copyright © 2020 Ramirez, Holmes, Scott, Ozzoude, Adamo, Szilagyi, Goubran, Gao, Arnott, Lawrence-Dewar, Beaton, Strother, Munoz, Masellis, Swartz, Bartha, Symons, Black and the ONDRI Investigators.

Références

Neuroimage. 2002 Nov;17(3):1087-100
pubmed: 12414252
Stroke. 2009 Nov;40(11):3455-60
pubmed: 19762705
NPJ Genom Med. 2016 Sep 21;1:16032
pubmed: 29263818
Mov Disord. 2017 Jun;32(6):853-864
pubmed: 28467028
Stroke. 2011 Sep;42(9):2672-713
pubmed: 21778438
Neurology. 2019 Oct 29;93(18):e1699-e1706
pubmed: 31578297
Brain. 2011 Feb;134(Pt 2):335-44
pubmed: 21257651
Lancet Neurol. 2013 Aug;12(8):822-38
pubmed: 23867200
Semin Neurol. 2016 Jun;36(3):233-43
pubmed: 27214698
Alzheimers Dement. 2015 Dec;11(12):1480-1488
pubmed: 26079413
Neurology. 1999 Nov 10;53(8):1698-704
pubmed: 10563615
Transl Vis Sci Technol. 2019 Sep 11;8(5):6
pubmed: 31588371
Stroke. 2010 Nov;41(11):2483-90
pubmed: 20864661
Int J Stroke. 2016 Feb;11(2):239-52
pubmed: 26783316
J Magn Reson Imaging. 2010 Jun;31(6):1311-22
pubmed: 20512882
Nat Rev Neurol. 2020 Mar;16(3):137-153
pubmed: 32094487
Brain. 2011 Sep;134(Pt 9):2456-77
pubmed: 21810890
Stroke. 2008 Apr;39(4):1134-41
pubmed: 18323507
Neurochem Res. 2015 Dec;40(12):2583-99
pubmed: 25947369
Neuroimage. 2014 Jul 15;95:217-31
pubmed: 24657354
Stroke. 2011 Feb;42(2):359-66
pubmed: 21193752
Neuroepidemiology. 2015;45(3):161-76
pubmed: 26505981
J Neurol Sci. 1994 Jul;124 Suppl:96-107
pubmed: 7807156
Alzheimers Dement. 2011 May;7(3):270-9
pubmed: 21514249
Neurobiol Aging. 2019 May;77:183-193
pubmed: 30875655
PLoS Comput Biol. 2019 Jun 20;15(6):e1006907
pubmed: 31220072
J Neurol Neurosurg Psychiatry. 1988 Jun;51(6):745-52
pubmed: 2841426
Brain. 2008 Sep;131(Pt 9):2443-54
pubmed: 18669512
Stroke. 2005 Nov;36(11):2342-3; author reply 2343-4
pubmed: 16239634
Int J Stroke. 2018 Oct;13(7):743-758
pubmed: 30021491
Stroke. 2013 Jun;44(6):1732-5
pubmed: 23640831
Neurology. 2018 Feb 20;90(8):e673-e682
pubmed: 29374101
Brain Res. 2011 Jan 12;1368:222-30
pubmed: 21040716
J Magn Reson Imaging. 2019 Feb;49(2):456-465
pubmed: 30635988
J Neurol Neurosurg Psychiatry. 2011 Feb;82(2):126-35
pubmed: 20935330
Neurobiol Aging. 2005 Apr;26(4):491-510
pubmed: 15653178
Front Neurol Neurosci. 2014;34:95-108
pubmed: 24777134
Neuropathol Appl Neurobiol. 2007 Dec;33(6):670-83
pubmed: 17990995
Stroke. 2006 Sep;37(9):2220-41
pubmed: 16917086
Int J Stroke. 2018 Jun;13(4):406-419
pubmed: 29171360
Neurology. 2015 Dec 1;85(22):1930-6
pubmed: 26537052
AJNR Am J Neuroradiol. 2006 Nov-Dec;27(10):2141-5
pubmed: 17110684
Stroke. 2010 Oct;41(10 Suppl):S103-6
pubmed: 20876479
Neuroimage. 2013 Feb 1;66:50-70
pubmed: 23142652
Lancet Neurol. 2009 Feb;8(2):165-74
pubmed: 19161908
Int J Stroke. 2020 Aug;15(6):668-688
pubmed: 31221036
Neuroimage. 2011 Jan 15;54(2):963-73
pubmed: 20849961
Stroke. 2009 Jan;40(1):94-9
pubmed: 19008468
Int J Stroke. 2016 Jul;11(5):509-18
pubmed: 27073189
BMC Med Res Methodol. 2019 May 15;19(1):102
pubmed: 31092212
Arch Neurol. 2011 May;68(5):656-9
pubmed: 21555643
JAMA Neurol. 2016 Aug 1;73(8):934-43
pubmed: 27271785
Radiology. 1995 Feb;194(2):469-76
pubmed: 7824728
J Vis Exp. 2014 Apr 14;(86):
pubmed: 24797507
J Alzheimers Dis. 2015;43(2):415-24
pubmed: 25096616
Stroke. 2015 Jun;46(6):1707-9
pubmed: 25908461
Neurology. 2013 Apr 23;80(17):1551-6
pubmed: 23553482
Neuroimage. 1995 Jun;2(2):89-101
pubmed: 9343592
Circ Res. 2017 Feb 3;120(3):439-448
pubmed: 28154096
Sleep. 2015 Jun 01;38(6):853-8
pubmed: 26163465
Nat Rev Neurol. 2015 Aug;11(8):457-70
pubmed: 26195256
AJNR Am J Neuroradiol. 2011 Apr;32(4):709-13
pubmed: 21349956
Neurology. 2011 Mar 15;76(11):1006-14
pubmed: 21325651
Neurology. 2016 Nov 29;87(22):2333-2339
pubmed: 27794113
Lancet Neurol. 2007 Jul;6(7):611-9
pubmed: 17582361
AJNR Am J Neuroradiol. 2005 Jun-Jul;26(6):1512-20
pubmed: 15956523
Cerebrovasc Dis. 2002;13 Suppl 2:1-6
pubmed: 11901235
Alzheimers Res Ther. 2018 Sep 5;10(1):89
pubmed: 30185213
Lancet Neurol. 2018 Nov;17(11):1016-1024
pubmed: 30353860
Cerebrovasc Dis. 2006;21(5-6):315-22
pubmed: 16490940
Stroke. 2009 Mar;40(3 Suppl):S48-52
pubmed: 19064767
Int J Stroke. 2017 Oct;12(8):886-895
pubmed: 28441928
PLoS One. 2017 Jan 17;12(1):e0170018
pubmed: 28095463
PLoS One. 2019 Dec 20;14(12):e0226715
pubmed: 31860686
Stroke. 2005 Jan;36(1):50-5
pubmed: 15576652
Lancet Neurol. 2010 Jul;9(7):689-701
pubmed: 20610345
Neurobiol Aging. 2014 Sep;35(9):2118-25
pubmed: 24731517
Int J Stroke. 2016 Oct;11(7):807-22
pubmed: 27443991
Neurology. 2009 Nov 24;73(21):1759-66
pubmed: 19933977
Stroke. 2017 Feb;48(2):e44-e71
pubmed: 27980126
Arch Neurol. 2008 Jun;65(6):790-5
pubmed: 18541799
Curr Atheroscler Rep. 2003 Jul;5(4):260-6
pubmed: 12793966
Can J Neurol Sci. 2019 Sep;46(5):491-498
pubmed: 31217043
Stroke. 1988 May;19(5):604-7
pubmed: 3363593
Science. 2013 Oct 18;342(6156):373-7
pubmed: 24136970
Sci Rep. 2018 Feb 1;8(1):2132
pubmed: 29391404
Brain Topogr. 2013 Jan;26(1):35-8
pubmed: 22562092
Circulation. 2015 Aug 11;132(6):509-16
pubmed: 26137955
Int J Stroke. 2019 Jun;14(4):359-371
pubmed: 30762496
Int J Stroke. 2018 Jun;13(4):420-443
pubmed: 29171361
Can J Neurol Sci. 2017 Mar;44(2):196-202
pubmed: 28003035
J Alzheimers Dis. 2017;59(2):707-721
pubmed: 28671116
Stroke. 2013 Jul;44(7):2064-89
pubmed: 23652265
J Neuropathol Exp Neurol. 2017 Apr 1;76(4):299-312
pubmed: 28431180
Arch Neurol. 2010 Nov;67(11):1370-8
pubmed: 21060014
Brain. 2017 Apr 1;140(4):1107-1116
pubmed: 28335021
Neuroimage. 2004 Aug;22(4):1492-502
pubmed: 15275906
Brain. 2015 Aug;138(Pt 8):2126-39
pubmed: 26115675
J Neurol Neurosurg Psychiatry. 2006 Feb;77(2):143-4
pubmed: 16421109
Curr Opin Psychiatry. 2008 May;21(3):268-74
pubmed: 18382226
Alzheimers Dement. 2011 Mar;7(2):171-4
pubmed: 21414554
Neuroimage. 2006 Jul 1;31(3):1116-28
pubmed: 16545965
J Alzheimers Dis. 2020;74(3):747-757
pubmed: 32116253
Neurology. 1998 Apr;50(4):841 and 11 pages following
pubmed: 9566356
Alzheimers Dement. 2011 May;7(3):263-9
pubmed: 21514250
Neurology. 2014 Jan 7;82(1):57-62
pubmed: 24285616
Stroke. 2004 Feb;35(2):415-9
pubmed: 14726554
Assessment. 2020 Apr 22;:1073191120913933
pubmed: 32321297
Neuroimage Clin. 2013 Aug 17;3:196-201
pubmed: 24179863
J Neurol Neurosurg Psychiatry. 2006 Feb;77(2):149-53
pubmed: 16421114
Cell Mol Neurobiol. 2016 Mar;36(2):289-99
pubmed: 26993511

Auteurs

Joel Ramirez (J)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.

Melissa F Holmes (MF)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.

Christopher J M Scott (CJM)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.

Miracle Ozzoude (M)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.

Sabrina Adamo (S)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.

Gregory M Szilagyi (GM)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.

Maged Goubran (M)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.
Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada.

Fuqiang Gao (F)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.

Stephen R Arnott (SR)

Rotman Research Institute, Baycrest, Toronto, ON, Canada.

Jane M Lawrence-Dewar (JM)

Thunder Bay Regional Health Research Institute, Thunder Bay, ON, Canada.

Derek Beaton (D)

Rotman Research Institute, Baycrest, Toronto, ON, Canada.

Stephen C Strother (SC)

Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada.
Rotman Research Institute, Baycrest, Toronto, ON, Canada.

Douglas P Munoz (DP)

Centre for Neuroscience Studies, Queen's University, Kingston, ON, Canada.

Mario Masellis (M)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.
Department of Medicine (Neurology), Sunnybrook Health Sciences Centre and University of Toronto, Toronto, ON, Canada.

Richard H Swartz (RH)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.
Department of Medicine (Neurology), Sunnybrook Health Sciences Centre and University of Toronto, Toronto, ON, Canada.

Robert Bartha (R)

Department of Medical Biophysics, Centre for Functional and Metabolic Mapping, Robarts Research Institute, University of Western Ontario, London, ON, Canada.

Sean Symons (S)

Department of Medical Imaging, University of Toronto, Sunnybrook Health Sciences Centre, Toronto, ON, Canada.

Sandra E Black (SE)

Hurvitz Brain Sciences Program, Sunnybrook Research Institute, University of Toronto, Toronto, ON, Canada.
Department of Medicine (Neurology), Sunnybrook Health Sciences Centre and University of Toronto, Toronto, ON, Canada.

Classifications MeSH