X-ray crystallographic structural studies of α-amylase I from Eisenia fetida.

Eisenia fetida amylase cold-active enzymes glycine-rich loop structural flexibility substrate complex substrate recognition

Journal

Acta crystallographica. Section D, Structural biology
ISSN: 2059-7983
Titre abrégé: Acta Crystallogr D Struct Biol
Pays: United States
ID NLM: 101676043

Informations de publication

Date de publication:
01 Sep 2020
Historique:
received: 09 03 2020
accepted: 23 07 2020
entrez: 3 9 2020
pubmed: 3 9 2020
medline: 10 7 2021
Statut: ppublish

Résumé

The earthworm Eisenia fetida possesses several cold-active enzymes, including α-amylase, β-glucanase and β-mannanase. E. fetida possesses two isoforms of α-amylase (Ef-Amy I and II) to digest raw starch. Ef-Amy I retains its catalytic activity at temperatures below 10°C. To identify the molecular properties of Ef-Amy I, X-ray crystal structures were determined of the wild type and of the inactive E249Q mutant. Ef-Amy I has structural similarities to mammalian α-amylases, including the porcine pancreatic and human pancreatic α-amylases. Structural comparisons of the overall structures as well as of the Ca

Identifiants

pubmed: 32876059
pii: S2059798320010165
doi: 10.1107/S2059798320010165
doi:

Substances chimiques

alpha-Amylases EC 3.2.1.1

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

834-844

Subventions

Organisme : Japan Society for the Promotion of Science
ID : 19H03090
Organisme : Japan Society for the Promotion of Science
ID : 16K08116

Auteurs

Yu Hirano (Y)

Institute for Quantum Life Science, National Institutes for Quantum and Radiological Science and Technology, 2-4 Shirakata, Tokai, Ibaraki 319-1106, Japan.

Kana Tsukamoto (K)

Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan.

Shingo Ariki (S)

Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan.

Yuki Naka (Y)

Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan.

Mitsuhiro Ueda (M)

Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan.

Taro Tamada (T)

Institute for Quantum Life Science, National Institutes for Quantum and Radiological Science and Technology, 2-4 Shirakata, Tokai, Ibaraki 319-1106, Japan.

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Classifications MeSH