Subsequent Neoplasm Risk Associated With Rare Variants in DNA Damage Response and Clinical Radiation Sensitivity Syndrome Genes in the Childhood Cancer Survivor Study.
Journal
JCO precision oncology
ISSN: 2473-4284
Titre abrégé: JCO Precis Oncol
Pays: United States
ID NLM: 101705370
Informations de publication
Date de publication:
2020
2020
Historique:
accepted:
30
04
2020
entrez:
14
9
2020
pubmed:
15
9
2020
medline:
15
9
2020
Statut:
epublish
Résumé
Radiotherapy for childhood cancer is associated with elevated subsequent neoplasm (SN) risk, but the contribution of rare variants in DNA damage response and radiation sensitivity genes to SN risk is unknown. We conducted whole-exome sequencing in a cohort of childhood cancer survivors originally diagnosed during 1970 to 1986 (mean follow-up, 32.7 years), with reconstruction of doses to body regions from radiotherapy records. We identified patients who developed SN types previously reported to be related to radiotherapy (RT-SNs; eg, basal cell carcinoma [BCC], breast cancer, meningioma, thyroid cancer, sarcoma) and matched controls (sex, childhood cancer type/diagnosis, age, SN location, radiation dose, survival). Conditional logistic regression assessed SN risk associated with potentially protein-damaging rare variants (SnpEff, ClinVar) in 476 DNA damage response or radiation sensitivity genes with exact permutation-based Among 5,105 childhood cancer survivors of European descent, 1,108 (21.7%) developed at least 1 RT-SN. Out-of-field RT-SN risk, excluding BCC, was associated with homologous recombination repair (HRR) gene variants (patient cases, 23.2%; controls, 10.8%; odds ratio [OR], 2.6; 95% CI, 1.7 to 3.9; In this large-scale discovery study, we identified novel associations between RT-SN risk after childhood cancer and potentially protein-damaging rare variants in genes involved in DNA double-strand break repair, particularly HRR. With replication, these results could affect screening recommendations for childhood cancer survivors and risk-benefit assessments of treatment approaches.
Identifiants
pubmed: 32923912
doi: 10.1200/PO.20.00141
pii: 2000141
pmc: PMC7469586
pii:
doi:
Types de publication
Journal Article
Langues
eng
Subventions
Organisme : NCI NIH HHS
ID : K08 CA234232
Pays : United States
Organisme : NCI NIH HHS
ID : P30 CA021765
Pays : United States
Organisme : NCI NIH HHS
ID : U24 CA055727
Pays : United States
Informations de copyright
© 2020 by American Society of Clinical Oncology.
Déclaration de conflit d'intérêts
The following represents disclosure information provided by authors of this manuscript. All relationships are considered compensated unless otherwise noted. Relationships are self-held unless noted. I = Immediate Family Member, Inst = My Institution. Relationships may not relate to the subject matter of this manuscript. For more information about ASCO's conflict of interest policy, please refer to www.asco.org/rwc or ascopubs.org/po/authors/author-center. Open Payments is a public database containing information reported by companies about payments made to US-licensed physicians (Open Payments). Belynda D. HicksEmployment: United Therapeutics (I) Stock and Other Ownership Interests: United Therapeutics (I) Honoraria: Roche Molecular Diagnostics Travel, Accommodations, Expenses: Roche Molecular Diagnostics, United Therapeutics (I)Susan A. SmithHonoraria: Memorial Sloan-Kettering Cancer Center Travel, Accommodations, Expenses: Memorial Sloan-Kettering Cancer CenterDiana M. MerinoTravel, Accommodations, Expenses: Aetion No other potential conflicts of interest were reported.
Références
Cancer. 2016 Dec 1;122(23):3673-3681
pubmed: 27496084
Clin Cancer Res. 2018 Dec 15;24(24):6230-6235
pubmed: 30366939
Nat Rev Cancer. 2016 Jan;16(1):35-42
pubmed: 26667849
Nucleic Acids Res. 2010 Apr;38(6):1821-31
pubmed: 20019063
JAMA. 2010 Jul 14;304(2):172-9
pubmed: 20628130
Nature. 2016 Aug 17;536(7616):285-91
pubmed: 27535533
Int J Radiat Biol. 2017 Oct;93(10):1121-1127
pubmed: 28627265
N Engl J Med. 2016 Mar 3;374(9):833-42
pubmed: 26761625
Antioxid Redox Signal. 2014 Jul 10;21(2):251-9
pubmed: 24180216
Bioinformatics. 2013 Jun 1;29(11):1399-406
pubmed: 23539302
Science. 2019 Mar 15;363(6432):1170-1175
pubmed: 30872516
Nat Rev Cancer. 2015 Mar;15(3):166-80
pubmed: 25709118
Int J Mol Sci. 2018 Dec 25;20(1):
pubmed: 30585186
N Engl J Med. 2015 Dec 10;373(24):2336-2346
pubmed: 26580448
JAMA Oncol. 2016 May 1;2(5):616-624
pubmed: 26822237
Nat Rev Cancer. 2009 Feb;9(2):134-42
pubmed: 19148183
J Natl Cancer Inst. 2015 Apr 20;107(7):
pubmed: 25896519
J Clin Oncol. 2009 May 10;27(14):2308-18
pubmed: 19364948
Radiat Res. 2019 Aug;192(2):169-188
pubmed: 31211642
Semin Radiat Oncol. 1996 Oct;6(4):295-305
pubmed: 10717187
Nat Rev Cancer. 2005 Aug;5(8):649-55
pubmed: 16056260
Cell Rep. 2018 Apr 03;23(1):239-254.e6
pubmed: 29617664
Trends Cell Biol. 2016 Jan;26(1):52-64
pubmed: 26437586
Nature. 2014 Jan 16;505(7483):302-8
pubmed: 24429628
Nature. 2019 Mar;567(7747):267-272
pubmed: 30842657
Fly (Austin). 2012 Apr-Jun;6(2):80-92
pubmed: 22728672
Mutat Res. 2017 Dec;806:64-74
pubmed: 28779875
JAMA. 2011 Jun 8;305(22):2311-9
pubmed: 21642683
Cancer Genet. 2019 Jun;235-236:57-64
pubmed: 31078449
Genet Med. 2018 Apr;20(4):452-457
pubmed: 28837162
J Clin Oncol. 2018 Jul 10;36(20):2078-2087
pubmed: 29847298
Nature. 2015 Oct 1;526(7571):68-74
pubmed: 26432245
Nature. 2018 Mar 15;555(7696):321-327
pubmed: 29489754
Nat Rev Cancer. 2017 Apr;17(4):239-253
pubmed: 28256574
Nat Genet. 2013 Oct;45(10):1113-20
pubmed: 24071849
J Clin Oncol. 2015 Nov 1;33(31):3568-75
pubmed: 26261260
Cancer Epidemiol Biomarkers Prev. 2015 Apr;24(4):653-63
pubmed: 25834148
J Clin Oncol. 2018 Jul 20;36(21):2145-2152
pubmed: 29874133
Lancet Oncol. 2018 Jun;19(6):785-798
pubmed: 29753700
Genome Med. 2011 Aug 23;3(8):52
pubmed: 21861849
Nucleic Acids Res. 2014 Jan;42(Database issue):D980-5
pubmed: 24234437
Oncotarget. 2017 Dec 4;8(68):112942-112958
pubmed: 29348879
J Clin Oncol. 2018 Feb 20;36(6):591-599
pubmed: 29300620
Hum Mol Genet. 2009 Sep 15;18(18):3484-95
pubmed: 19561169
PLoS Genet. 2018 Dec 26;14(12):e1007752
pubmed: 30586411
BMC Genomics. 2018 Mar 6;19(1):182
pubmed: 29510662