Volume electron microscopy: analyzing the lung.

3D reconstruction Array tomography Electron tomography Focused ion beam scanning electron microscopy Lung Serial block-face scanning electron microscopy Serial sectioning transmission electron microscopy Volume electron microscopy

Journal

Histochemistry and cell biology
ISSN: 1432-119X
Titre abrégé: Histochem Cell Biol
Pays: Germany
ID NLM: 9506663

Informations de publication

Date de publication:
Feb 2021
Historique:
accepted: 31 08 2020
pubmed: 19 9 2020
medline: 3 7 2021
entrez: 18 9 2020
Statut: ppublish

Résumé

Since its entry into biomedical research in the first half of the twentieth century, electron microscopy has been a valuable tool for lung researchers to explore the lung's delicate ultrastructure. Among others, it proved the existence of a continuous alveolar epithelium and demonstrated the surfactant lining layer. With the establishment of serial sectioning transmission electron microscopy, as the first "volume electron microscopic" technique, electron microscopy entered the third dimension and investigations of the lung's three-dimensional ultrastructure became possible. Over the years, further techniques, ranging from electron tomography over serial block-face and focused ion beam scanning electron microscopy to array tomography became available. All techniques cover different volumes and resolutions, and, thus, different scientific questions. This review gives an overview of these techniques and their application in lung research, focusing on their fields of application and practical implementation. Furthermore, an introduction is given how the output raw data are processed and the final three-dimensional models can be generated.

Identifiants

pubmed: 32944795
doi: 10.1007/s00418-020-01916-3
pii: 10.1007/s00418-020-01916-3
pmc: PMC7910248
doi:

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

241-260

Subventions

Organisme : Medizinischen Hochschule Hannover (DE)
ID : Junge Akademie 2.0

Références

Microsc Microanal. 2018 Oct;24(5):526-544
pubmed: 30246679
Methods Cell Biol. 2019;152:41-67
pubmed: 31326026
Angew Chem Int Ed Engl. 2014 Dec 15;53(51):13972-7
pubmed: 25371081
Anal Bioanal Chem. 2014 Jun;406(16):3863-73
pubmed: 24448971
EMBO J. 2004 Sep 15;23(18):3583-8
pubmed: 15318169
Tissue Cell. 2019 Apr;57:123-128
pubmed: 30385054
Nat Protoc. 2012 Jan 12;7(2):193-206
pubmed: 22240582
J Microsc. 2014 Jun;254(3):109-14
pubmed: 24707797
J Microsc. 2015 Aug;259(2):114-120
pubmed: 25627873
Nat Methods. 2012 Jun 10;9(7):717-20
pubmed: 22688414
Cell Tissue Res. 1978 Dec 29;195(3):395-410
pubmed: 103623
Fed Proc. 1974 Dec;33(12):2336-40
pubmed: 4435234
J Microsc. 2016 Jul;263(1):3-9
pubmed: 26800017
Anat Rec. 1985 Jun;212(2):132-42, 156-7
pubmed: 2876661
Elife. 2020 Mar 09;9:
pubmed: 32149604
Dev Dyn. 2005 Aug;233(4):1261-71
pubmed: 15937935
Histochem Cell Biol. 2018 Dec;150(6):661-676
pubmed: 30390118
J Struct Biol. 2017 Feb;197(2):135-144
pubmed: 27288866
Am J Pathol. 1968 Nov;53(5):809-33
pubmed: 4234739
Tissue Cell. 2019 Apr;57:111-122
pubmed: 30220487
Wien Med Wochenschr. 2018 Sep;168(11-12):322-329
pubmed: 30084092
Neuron. 2007 Jul 5;55(1):25-36
pubmed: 17610815
Ultrastruct Pathol. 1984;6(4):331-9
pubmed: 6485123
Methods Cell Biol. 2010;96:331-61
pubmed: 20869530
Am J Respir Crit Care Med. 2019 May 1;199(9):1153-1156
pubmed: 30758981
J Gen Microbiol. 1955 Oct;13(2):327-9
pubmed: 13278481
IEEE Trans Pattern Anal Mach Intell. 2012 Nov;34(11):2274-82
pubmed: 22641706
J Comput Chem. 2004 Oct;25(13):1605-12
pubmed: 15264254
Respir Physiol Neurobiol. 2010 Feb 28;170(2):202-9
pubmed: 20038456
Stain Technol. 1975 Jul;50(4):265-9
pubmed: 1103373
Nat Commun. 2018 Jan 30;9(1):437
pubmed: 29382816
Nat Methods. 2015 Jun;12(6):481-3
pubmed: 26020499
Magn Reson Imaging. 2012 Nov;30(9):1323-41
pubmed: 22770690
Am J Physiol Lung Cell Mol Physiol. 2018 Aug 1;315(2):L173-L183
pubmed: 29644892
Anat Rec. 1981 Aug;200(4):447-59
pubmed: 7305012
Ultramicroscopy. 2014 Feb;137:20-9
pubmed: 24275523
Am J Anat. 1976 Jul;146(3):255-71
pubmed: 941853
Cell. 2015 Jul 30;162(3):648-61
pubmed: 26232230
Mol Reprod Dev. 2015 Jul-Aug;82(7-8):518-29
pubmed: 26153368
Anat Rec. 1990 Sep;228(1):35-45
pubmed: 2240600
Sci Data. 2016 Nov 08;3:160100
pubmed: 27824337
J Histochem Cytochem. 1984 Apr;32(4):455-60
pubmed: 6323574
Cell Tissue Res. 2017 Mar;367(3):427-444
pubmed: 28144783
Biochemistry (Mosc). 2004 Nov;69(11):1219-25
pubmed: 15627375
J Struct Biol. 2013 Nov;184(2):355-60
pubmed: 24121039
Anat Rec. 1996 Apr;244(4):481-9
pubmed: 8694283
J Struct Biol. 2005 Apr;150(1):109-21
pubmed: 15797735
Z Zellforsch Mikrosk Anat. 1973 Dec 21;145(4):521-40
pubmed: 4774984
Front Neuroanat. 2018 Sep 28;12:76
pubmed: 30323746
PLoS One. 2012;7(6):e38011
pubmed: 22723842
J Vis Exp. 2011 Jul 06;(53):e2588
pubmed: 21775953
Int J Mol Sci. 2020 Apr 27;21(9):
pubmed: 32349261
Am J Anat. 1985 Sep;174(1):1-14
pubmed: 4061335
Am J Respir Crit Care Med. 2006 Mar 15;173(6):632-8
pubmed: 16415275
Microvasc Res. 1995 Nov;50(3):397-416
pubmed: 8583953
J Biophys Biochem Cytol. 1958 May 25;4(3):345-8
pubmed: 13549513
BMC Cell Biol. 2016 Dec 12;17(1):38
pubmed: 27955619
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
J Morphol. 1984 Nov;182(2):169-78
pubmed: 6512860
Micron. 2014 Jun;61:9-19
pubmed: 24792442
J Pathol Clin Res. 2015 Jun 03;1(4):252-63
pubmed: 27499909
Histochem Cell Biol. 2016 Dec;146(6):695-707
pubmed: 27688057
Respir Physiol. 1978 Feb;32(2):121-40
pubmed: 644146
PLoS Biol. 2016 Jan 04;14(1):e1002340
pubmed: 26727152
Nat Commun. 2015 Aug 03;6:7923
pubmed: 26235643
Sci Rep. 2016 Mar 29;6:23721
pubmed: 27020327
Cell Physiol Biochem. 2010;25(1):55-62
pubmed: 20054144
Anat Rec. 1986 Dec;216(4):449-70
pubmed: 3541684
Adv Mater. 2019 Aug;31(32):e1900488
pubmed: 31197896
Arch Biochem Biophys. 2015 Sep 1;581:122-30
pubmed: 25703192
Cell Tissue Res. 2011 Sep;345(3):391-403
pubmed: 21858462
Histochem Cell Biol. 2021 Feb;155(2):261-269
pubmed: 32880000
Nature. 2017 Oct 4;550(7675):167
pubmed: 29022937
Histochem Cell Biol. 2010 Oct;134(4):319-26
pubmed: 20809233
J Microsc. 2013 Nov;252(2):93-9
pubmed: 24111814
Anat Rec. 1974 Nov;180(3):457-63
pubmed: 4214514
Nat Methods. 2015 Jun;12(6):541-6
pubmed: 25867849
Am Rev Respir Dis. 1982 Aug;126(2):332-7
pubmed: 7103258
Am Rev Respir Dis. 1982 Aug;126(2):326-31
pubmed: 7103257
Int J Mol Sci. 2020 Feb 06;21(3):
pubmed: 32041332
Cytoskeleton (Hoboken). 2014 May;71(5):294-301
pubmed: 24616277
Methods Appl Fluoresc. 2018 Mar 16;6(2):022003
pubmed: 29422456
Cell Physiol Biochem. 2010;25(1):27-40
pubmed: 20054142
Nat Protoc. 2020 Jun;15(6):2041-2070
pubmed: 32405053
Science. 1954 Dec 24;120(3130):1071-3
pubmed: 13216224
J Histochem Cytochem. 2019 May;67(5):351-360
pubmed: 30624131
Microvasc Res. 1973 Mar;5(2):199-212
pubmed: 4121024
Nat Commun. 2014 Dec 04;5:5727
pubmed: 25473808
Histochem Cell Biol. 2018 Dec;150(6):677-691
pubmed: 30390117
Lab Invest. 2019 Jun;99(6):830-852
pubmed: 30700849
J Cell Sci. 2016 Feb 1;129(3):469-76
pubmed: 26787742
Annu Rev Biochem. 2005;74:833-65
pubmed: 15952904
Proc Natl Acad Sci U S A. 1973 Feb;70(2):433-7
pubmed: 4510287
Am J Physiol Renal Physiol. 2020 May 1;318(5):F1246-F1251
pubmed: 32249613
Adv Mater. 2015 Oct 14;27(38):5638-63
pubmed: 26087941
J Microsc. 2011 Jun;242(3):221-7
pubmed: 21175615
Scan Electron Microsc. 1981;(Pt 2):73-6
pubmed: 7323733
Q Rev Biophys. 2012 Feb;45(1):27-56
pubmed: 22082691
Annu Rev Biophys Biomol Struct. 2006;35:199-224
pubmed: 16689634
J Vis Exp. 2018 Mar 20;(133):
pubmed: 29630046
BMC Biol. 2018 Sep 6;16(1):98
pubmed: 30189863
Ann Anat. 2018 May;217:82-96
pubmed: 29526767
Exp Cell Res. 1957 Dec;13(3):599-601
pubmed: 13490380
J Cell Biol. 1966 Aug;30(2):424-32
pubmed: 4165523
J Virol. 2019 Sep 12;93(19):
pubmed: 31292247
J Microsc. 1980 Feb;118(2):221-7
pubmed: 7359581
J Thromb Haemost. 2012 Jun;10(6):979-84
pubmed: 22646831
Methods Mol Biol. 2007;369:143-73
pubmed: 17656750
Trends Cell Biol. 2005 Jan;15(1):43-51
pubmed: 15653077
Viruses. 2018 Aug 20;10(8):
pubmed: 30127286
Mol Reprod Dev. 2015 Jul-Aug;82(7-8):530-47
pubmed: 25652003
Biotechniques. 2006 Aug;41(2):137, 139, 141 passim
pubmed: 16925014
Anat Rec. 1952 Aug;113(4):437-49
pubmed: 14943972
J Struct Biol. 2020 May 1;210(2):107492
pubmed: 32156581
Acta Anat (Basel). 1971;78(3):425-43
pubmed: 4995841
Am J Physiol Lung Cell Mol Physiol. 2016 Mar 1;310(5):L387-92
pubmed: 26684253
Nat Methods. 2015 Nov;12(11):1021-31
pubmed: 26513553
Proc Natl Acad Sci U S A. 1973 Jan;70(1):57-61
pubmed: 4509664
J Microsc. 1991 Apr;162(Pt 1):91-104
pubmed: 1908012
PLoS Biol. 2004 Nov;2(11):e329
pubmed: 15514700
Cell Tissue Res. 1980;209(3):485-98
pubmed: 6773663
J Ultrastruct Res. 1957 Dec;1(2):138-9
pubmed: 13492346
J Microsc. 2015 Aug;259(2):80-96
pubmed: 25623622
Anat Rec. 1985 Dec;213(4):540-50
pubmed: 4083534
Am J Physiol Lung Cell Mol Physiol. 2019 Dec 1;317(6):L778-L784
pubmed: 31508976
J Struct Biol. 2009 Apr;166(1):1-7
pubmed: 19116171
Respir Physiol. 1968 Jan;4(1):42-57
pubmed: 4867416
Am Rev Respir Dis. 1973 Aug;108(2):328-33
pubmed: 4720694
Front Physiol. 2019 Nov 21;10:1357
pubmed: 31824323
J Morphol. 1978 May;156(2):141-55
pubmed: 642014
Dev Cell. 2007 Mar;12(3):349-61
pubmed: 17336902
Histochem Cell Biol. 2012 Oct;138(4):549-56
pubmed: 22918510
COPD. 2009 Dec;6(6):421-31
pubmed: 19938964
Ultramicroscopy. 2008 Jun;108(7):663-70
pubmed: 18068303
J Struct Biol. 1996 Jan-Feb;116(1):71-6
pubmed: 8742726
Front Neural Circuits. 2014 Jun 27;8:68
pubmed: 25018701
Biol Cell. 2016 Nov;108(11):307-323
pubmed: 27432264
Am J Respir Crit Care Med. 2003 Dec 15;168(12):1532-7
pubmed: 14551162
Histochem Cell Biol. 2008 Aug;130(2):185-96
pubmed: 18566823
Anat Rec. 1953 Oct;117(2):241-63
pubmed: 13104990
J Struct Biol. 2009 Feb;165(2):97-106
pubmed: 19059341
J Struct Biol. 2002 Apr-May;138(1-2):85-91
pubmed: 12160704
J Neurosci. 2006 Nov 22;26(47):12101-3
pubmed: 17122034
Protein Sci. 2020 Apr;29(4):872-882
pubmed: 31854478
J Microsc. 2018 May;270(2):142-149
pubmed: 29194648
Pulm Pharmacol Ther. 2011 Oct;24(5):452-65
pubmed: 21600999
J Biophys Biochem Cytol. 1958 May 25;4(3):233-42
pubmed: 13549493
Cell Tissue Res. 2017 Mar;367(3):413-426
pubmed: 27981379
Cell Tissue Res. 1978 Dec 12;194(3):419-32
pubmed: 103621
PLoS One. 2014 Dec 01;9(12):e113222
pubmed: 25438148

Auteurs

Jan Philipp Schneider (JP)

Institute of Functional and Applied Anatomy, Hannover Medical School, 30625, Hannover, Germany.
Biomedical Research in Endstage and Obstructive Lung Disease Hannover (BREATH), Member of the German Center for Lung Research (DZL), 30625, Hannover, Germany.

Jan Hegermann (J)

Institute of Functional and Applied Anatomy, Hannover Medical School, 30625, Hannover, Germany. hegermann.jan@mh-hannover.de.
Biomedical Research in Endstage and Obstructive Lung Disease Hannover (BREATH), Member of the German Center for Lung Research (DZL), 30625, Hannover, Germany. hegermann.jan@mh-hannover.de.
Research Core Unit Electron Microscopy, Hannover Medical School, 30625, Hannover, Germany. hegermann.jan@mh-hannover.de.

Christoph Wrede (C)

Institute of Functional and Applied Anatomy, Hannover Medical School, 30625, Hannover, Germany.
Biomedical Research in Endstage and Obstructive Lung Disease Hannover (BREATH), Member of the German Center for Lung Research (DZL), 30625, Hannover, Germany.
Research Core Unit Electron Microscopy, Hannover Medical School, 30625, Hannover, Germany.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH