Development of risk prediction models to predict urine culture growth for adults with suspected urinary tract infection in the emergency department: protocol for an electronic health record study from a single UK university hospital.

Diagnosis Hospital Prediction models Protocol Urinary tract infection

Journal

Diagnostic and prognostic research
ISSN: 2397-7523
Titre abrégé: Diagn Progn Res
Pays: England
ID NLM: 101718985

Informations de publication

Date de publication:
2020
Historique:
received: 16 04 2020
accepted: 18 08 2020
entrez: 25 9 2020
pubmed: 26 9 2020
medline: 26 9 2020
Statut: epublish

Résumé

Urinary tract infection (UTI) is a leading cause of hospital admissions and is diagnosed based on urinary symptoms and microbiological cultures. Due to lags in the availability of culture results of up to 72 h, and the limitations of routine diagnostics, many patients with suspected UTI are started on antibiotic treatment unnecessarily. Predictive models based on routinely collected clinical information may help clinicians to rule out a diagnosis of bacterial UTI in low-risk patients shortly after hospital admission, providing additional evidence to guide antibiotic treatment decisions. Using electronic hospital records from Queen Elizabeth Hospital Birmingham (QEHB) collected between 2011 and 2017, we aim to develop a series of models that estimate the probability of bacterial UTI at presentation in the emergency department (ED) among individuals with suspected UTI syndromes. Predictions will be made during ED attendance and at different time points after hospital admission to assess whether predictive performance may be improved over time as more information becomes available about patient status. All models will be externally validated for expected future performance using QEHB data from 2018/2019. Risk prediction models using electronic health records offer a new approach to improve antibiotic prescribing decisions, integrating clinical and demographic data with test results to stratify patients according to their probability of bacterial infection. Used in conjunction with expert opinion, they may help clinicians to identify patients that benefit the most from early antibiotic cessation.

Sections du résumé

BACKGROUND BACKGROUND
Urinary tract infection (UTI) is a leading cause of hospital admissions and is diagnosed based on urinary symptoms and microbiological cultures. Due to lags in the availability of culture results of up to 72 h, and the limitations of routine diagnostics, many patients with suspected UTI are started on antibiotic treatment unnecessarily. Predictive models based on routinely collected clinical information may help clinicians to rule out a diagnosis of bacterial UTI in low-risk patients shortly after hospital admission, providing additional evidence to guide antibiotic treatment decisions.
METHODS METHODS
Using electronic hospital records from Queen Elizabeth Hospital Birmingham (QEHB) collected between 2011 and 2017, we aim to develop a series of models that estimate the probability of bacterial UTI at presentation in the emergency department (ED) among individuals with suspected UTI syndromes. Predictions will be made during ED attendance and at different time points after hospital admission to assess whether predictive performance may be improved over time as more information becomes available about patient status. All models will be externally validated for expected future performance using QEHB data from 2018/2019.
DISCUSSION CONCLUSIONS
Risk prediction models using electronic health records offer a new approach to improve antibiotic prescribing decisions, integrating clinical and demographic data with test results to stratify patients according to their probability of bacterial infection. Used in conjunction with expert opinion, they may help clinicians to identify patients that benefit the most from early antibiotic cessation.

Identifiants

pubmed: 32974424
doi: 10.1186/s41512-020-00083-2
pii: 83
pmc: PMC7493920
doi:

Types de publication

Journal Article

Langues

eng

Pagination

15

Subventions

Organisme : Department of Health
ID : CS-2016-16-007
Pays : United Kingdom

Informations de copyright

© The Author(s) 2020.

Déclaration de conflit d'intérêts

Competing interestsThe authors declare that they have no competing interests.

Références

BMC Med Inform Decis Mak. 2019 Aug 23;19(1):171
pubmed: 31443706
Stat Med. 2015 Nov 10;34(25):3298-317
pubmed: 26095614
Stat Med. 2011 Feb 20;30(4):377-99
pubmed: 21225900
Biom J. 2015 Jul;57(4):614-32
pubmed: 25630926
Am J Epidemiol. 2018 Jul 1;187(7):1530-1538
pubmed: 29584812
Arch Intern Med. 2007 Nov 12;167(20):2201-6
pubmed: 17998492
Med Decis Making. 2011 May-Jun;31(3):405-11
pubmed: 21191120
Sci Rep. 2019 Dec 23;9(1):19694
pubmed: 31873085
J Clin Epidemiol. 2006 Oct;59(10):1092-101
pubmed: 16980150
J Clin Epidemiol. 2001 Aug;54(8):774-81
pubmed: 11470385
Br J Gen Pract. 2006 Aug;56(529):606-12
pubmed: 16882379
J Clin Microbiol. 2015 Aug;53(8):2686-92
pubmed: 26063863
Stat Med. 2008 Jul 30;27(17):3227-46
pubmed: 18203127
BMC Infect Dis. 2016 Apr 18;16:166
pubmed: 27091375
Int J Med Inform. 2007 Apr;76(4):289-96
pubmed: 16469531
J Am Geriatr Soc. 2009 Jan;57(1):107-14
pubmed: 19054190
Bioinformatics. 2010 Feb 1;26(3):440-3
pubmed: 19880370
J R Soc Med. 2016 Jun;109(6):230-238
pubmed: 27053359
Arch Intern Med. 1985 Dec;145(12):2222-7
pubmed: 2934038
PLoS One. 2018 Mar 7;13(3):e0194085
pubmed: 29513742

Auteurs

Patrick Rockenschaub (P)

Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA UK.

Martin J Gill (MJ)

Department of Microbiology, Queen Elizabeth Hospital Birmingham, University Hospitals Birmingham NHS Foundation Trust, Mindelsohn Way, Birmingham, B15 2TH UK.

David McNulty (D)

Health Informatics, University Hospitals Birmingham NHS Foundation Trust, 11-13 Frederick Road, Edgbaston, Birmingham, B15 1JD UK.

Orlagh Carroll (O)

Department of Medical Statistics, London School of Hygiene and Tropical Medicine, Keppel Street, London, WC1E 7HT UK.

Nick Freemantle (N)

Institute of Clinical Trials and Methodology, University College London, 90 High Holborn, London, WC1V 6LJ UK.

Laura Shallcross (L)

Institute of Health Informatics, University College London, 222 Euston Road, London, NW1 2DA UK.

Classifications MeSH