Development and Validation of a Serum Metabolomic Signature for Endometrial Cancer Screening in Postmenopausal Women.


Journal

JAMA network open
ISSN: 2574-3805
Titre abrégé: JAMA Netw Open
Pays: United States
ID NLM: 101729235

Informations de publication

Date de publication:
01 09 2020
Historique:
entrez: 28 9 2020
pubmed: 29 9 2020
medline: 14 1 2021
Statut: epublish

Résumé

Endometrial carcinoma (EC) is the most commonly diagnosed gynecologic cancer. Its early detection is advisable because 20% of women have advanced disease at the time of diagnosis. To clinically validate a metabolomics-based classification algorithm as a screening test for EC. This diagnostic study enrolled 2 cohorts. A multicenter prospective cohort, with 50 cases (postmenopausal women with EC; International Federation of Gynecology and Obstetrics stage I-III and grade G1-G3) and 70 controls (no EC but matched on age, years from menopause, tobacco use, and comorbidities), was used to train multiple classification models. The accuracy of each trained model was then used as a statistical weight to produce an ensemble machine learning algorithm for testing, which was validated with a subsequent prospective cohort of 1430 postmenopausal women. The study was conducted at the San Giovanni di Dio e Ruggi d'Aragona University Hospital of Salerno (Italy) and Lega Italiana per la Lotta contro i Tumori clinic in Avellino (Italy). Data collection was conducted from January 2018 to February 2019, and analysis was conducted from January to March 2019. The presence or absence of EC based on evaluation of the blood metabolome. Metabolites were extracted from dried blood samples from all participants and analyzed by gas chromatography-mass spectrometry. A confusion matrix was used to summarize test results. Performance indices included sensitivity, specificity, positive and negative predictive values, positive and negative likelihood ratios, and accuracy. Confirmation or exclusion of EC in women with a positive test result was by means of hysteroscopy. Participants with negative results were followed up 1 year after enrollment to investigate the appearance of EC signs. The study population consisted of 1550 postmenopausal women. The mean (SD) age was 68.2 (11.7) years for participants with no EC in the training cohort, 69.4 (13.8) years for women with EC in the training cohort, and 59.7 (7.7) years for women in the validation cohort. Application of the ensemble machine learning to the validation cohort resulted in 16 true-positives, 2 false-positives, and 0 false-negatives, and it correctly classified more than 99% of samples. Disease prevalence was 1.12% (16 of 1430). In this study, dried blood metabolomic profile was used to assess the presence or absence of EC in postmenopausal women not receiving hormonal therapy with greater than 99% accuracy.

Identifiants

pubmed: 32986110
pii: 2770880
doi: 10.1001/jamanetworkopen.2020.18327
pmc: PMC7522698
doi:

Types de publication

Journal Article Multicenter Study Research Support, Non-U.S. Gov't Validation Study

Langues

eng

Sous-ensembles de citation

IM

Pagination

e2018327

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Auteurs

Jacopo Troisi (J)

Department of Medicine, Surgery and Dentistry, Scuola Medica Salernitana, University of Salerno, Baronissi, Salerno, Italy.
Theoreo, Montecorvino Pugliano, Salerno, Italy.
European Biomedical Research Institute of Salerno, Salerno, Italy.

Antonio Raffone (A)

Department of Neurosciences and Reproductive and Dentistry Sciences, University of Naples Federico II, Naples, Italy.

Antonio Travaglino (A)

Department of Advanced Biomedical Sciences, University of Naples Federico II, Naples, Italy.

Gaetano Belli (G)

Lega Italiana per la Lotta contro i Tumori, Avellino Section, Avellino, Italy.

Carmen Belli (C)

Lega Italiana per la Lotta contro i Tumori, Avellino Section, Avellino, Italy.

Santosh Anand (S)

Università degli Studi di Milano-Bicocca, Milano, Italy.
Faculty of Medicine, University of Geneva Medical School, Geneva, Switzerland.

Luigi Giugliano (L)

Department of Medicine, Surgery and Dentistry, Scuola Medica Salernitana, University of Salerno, Baronissi, Salerno, Italy.

Pierpaolo Cavallo (P)

Department of Physics, University of Salerno, Fisciano, Salerno, Italy.
Istituto Sistemi Complessi-Consiglio Nazionale delle Ricerche, Rome, Italy.

Giovanni Scala (G)

Hosmotic, Vico Equense, Naples, Italy.

Steven Symes (S)

Department of Chemistry and Physics, The University of Tennessee at Chattanooga.
Department of Obstetrics and Gynecology, College of Medicine, University of Tennessee College of Medicine at Chattanooga.

Sean Richards (S)

Department of Obstetrics and Gynecology, College of Medicine, University of Tennessee College of Medicine at Chattanooga.
Department of Biology, Geology and Environmental Sciences, The University of Tennessee at Chattanooga.

David Adair (D)

Department of Obstetrics and Gynecology, College of Medicine, University of Tennessee College of Medicine at Chattanooga.

Alessio Fasano (A)

European Biomedical Research Institute of Salerno, Salerno, Italy.

Vincenzo Bottigliero (V)

Department of Medicine, Surgery and Dentistry, Scuola Medica Salernitana, University of Salerno, Baronissi, Salerno, Italy.

Maurizio Guida (M)

Theoreo, Montecorvino Pugliano, Salerno, Italy.
Department of Neurosciences and Reproductive and Dentistry Sciences, University of Naples Federico II, Naples, Italy.

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