Cannot see the diversity for all the species: Evaluating inclusion criteria for local species lists when using abundant citizen science data.

GBIF Swedish Species Gateway biodiversity citizen science data migratory birds occupancy model opportunistic observations presence‐only data primary biodiversity data site use

Journal

Ecology and evolution
ISSN: 2045-7758
Titre abrégé: Ecol Evol
Pays: England
ID NLM: 101566408

Informations de publication

Date de publication:
Sep 2020
Historique:
received: 20 01 2020
revised: 29 06 2020
accepted: 10 07 2020
entrez: 2 10 2020
pubmed: 3 10 2020
medline: 3 10 2020
Statut: epublish

Résumé

Abundant citizen science data on species occurrences are becoming increasingly available and enable identifying composition of communities occurring at multiple sites with high temporal resolution. However, for species displaying temporary patterns of local occurrences that are transient to some sites, biodiversity measures are clearly dependent on the criteria used to include species into local species lists. Using abundant opportunistic citizen science data from frequently visited wetlands, we investigated the sensitivity of α- and β-diversity estimates to the use raw versus detection-corrected data and to the use of inclusion criteria for species presence reflecting alternative site use. We tested seven inclusion criteria (with varying number of days required to be present) on time series of daily occurrence status during a breeding season of 90 days for 77 wetland bird species. We show that even when opportunistic presence-only observation data are abundant, raw data may not produce reliable local species richness estimates and rank sites very differently in terms of species richness. Furthermore, occupancy model based α- and β-diversity estimates were sensitive to the inclusion criteria used. Total species lists (all species observed at least once during a season) may therefore mask diversity differences among sites in local communities of species, by including vagrant species on potentially breeding communities and change the relative rank order of sites in terms of species richness. Very high sampling effort does not necessarily free opportunistic data from its inherent bias and can produce a pattern in which many species are observed at least once almost everywhere, thus leading to a possible paradox: The large amount of biological information may hinder its usefulness. Therefore, when prioritizing among sites to manage or preserve species diversity estimates need to be carefully related to relevant inclusion criteria depending on the diversity estimate in focus.

Identifiants

pubmed: 33005363
doi: 10.1002/ece3.6665
pii: ECE36665
pmc: PMC7520205
doi:

Types de publication

Journal Article

Langues

eng

Pagination

10057-10065

Informations de copyright

© 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

Déclaration de conflit d'intérêts

The authors declare no conflict of interest.

Références

Ecol Evol. 2017 Jun 15;7(15):5632-5644
pubmed: 28808543
Biodivers Data J. 2016 Mar 23;(4):e7644
pubmed: 27099553
Science. 2000 Mar 10;287(5459):1770-4
pubmed: 10710299
PLoS One. 2016 Jan 28;11(1):e0147796
pubmed: 26820846
Ecology. 2018 Aug;99(8):1825-1835
pubmed: 29802772
Am Nat. 2013 Apr;181(4):E83-90
pubmed: 23535624
Conserv Biol. 2010 Oct;24(5):1388-97
pubmed: 20337672
Trends Ecol Evol. 2004 Sep;19(9):497-503
pubmed: 16701313
Sci Rep. 2017 Aug 22;7(1):9132
pubmed: 28831097
Nature. 2000 May 11;405(6783):234-42
pubmed: 10821284
Ecol Appl. 2010 Dec;20(8):2157-69
pubmed: 21265449
Sci Rep. 2020 Jun 10;10(1):9380
pubmed: 32523129
Ecol Appl. 2019 Jan;29(1):e01827
pubmed: 30403308
Trends Ecol Evol. 2016 Jan;31(1):67-80
pubmed: 26701706
Proc Biol Sci. 2013 Jan 7;280(1750):20121931
pubmed: 23097514
Ecology. 2018 May;99(5):1051-1062
pubmed: 29516476
Nature. 2017 May 31;546(7656):65-72
pubmed: 28569811

Auteurs

Alejandro Ruete (A)

Greensway AB Uppsala Sweden.
Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden.

Debora Arlt (D)

Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden.
Swedish Species Information Centre Swedish University of Agricultural Sciences Uppsala Sweden.

Åke Berg (Å)

Swedish Biodiversity Centre Swedish University of Agricultural Sciences Uppsala Sweden.

Jonas Knape (J)

Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden.

Michał Żmihorski (M)

Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden.
Mammal Research Institute Polish Academy of Sciences Białowieża Poland.

Tomas Pärt (T)

Department of Ecology Swedish University of Agricultural Sciences Uppsala Sweden.

Classifications MeSH