The search for sexually antagonistic genes: Practical insights from studies of local adaptation and statistical genomics.
Evolutionary genomics
FIS
FST
fitness variation
genomic inference of natural selection
intralocus sexual conflict
local adaptation
Journal
Evolution letters
ISSN: 2056-3744
Titre abrégé: Evol Lett
Pays: England
ID NLM: 101715791
Informations de publication
Date de publication:
Oct 2020
Oct 2020
Historique:
received:
28
04
2020
revised:
13
07
2020
accepted:
28
07
2020
entrez:
5
10
2020
pubmed:
6
10
2020
medline:
6
10
2020
Statut:
epublish
Résumé
Sexually antagonistic (SA) genetic variation-in which alleles favored in one sex are disfavored in the other-is predicted to be common and has been documented in several animal and plant populations, yet we currently know little about its pervasiveness among species or its population genetic basis. Recent applications of genomics in studies of SA genetic variation have highlighted considerable methodological challenges to the identification and characterization of SA genes, raising questions about the feasibility of genomic approaches for inferring SA selection. The related fields of local adaptation and statistical genomics have previously dealt with similar challenges, and lessons from these disciplines can therefore help overcome current difficulties in applying genomics to study SA genetic variation. Here, we integrate theoretical and analytical concepts from local adaptation and statistical genomics research-including
Identifiants
pubmed: 33014417
doi: 10.1002/evl3.192
pii: EVL3192
pmc: PMC7523564
doi:
Banques de données
Dryad
['10.5061/dryad.b2rbnzscc']
Types de publication
Journal Article
Langues
eng
Pagination
398-415Informations de copyright
© 2020 The Authors. Evolution Letters published by Wiley Periodicals, Inc. on behalf of Society for the Study of Evolution (SSE) and European Society for Evolutionary Biology (ESEB).
Références
Evolution. 2014 Aug;68(8):2184-96
pubmed: 24766035
Evolution. 2009 Dec;63(12):3124-35
pubmed: 19624721
Nat Commun. 2019 Mar 25;10(1):1359
pubmed: 30911052
Genome Biol Evol. 2018 Mar 1;10(3):939-955
pubmed: 29608730
Philos Trans R Soc Lond B Biol Sci. 2018 Oct 5;373(1757):
pubmed: 30150224
Am J Hum Genet. 2017 Jul 6;101(1):5-22
pubmed: 28686856
Am Nat. 2015 Oct;186 Suppl 1:S24-36
pubmed: 26656214
Elife. 2019 Mar 21;8:
pubmed: 30895923
Proc Natl Acad Sci U S A. 2019 Nov 26;116(48):24157-24163
pubmed: 31719204
Am Nat. 2007 Jan;169(1):29-37
pubmed: 17206582
J Evol Biol. 2008 Jul;21(4):1046-54
pubmed: 18462311
Genetics. 2014 Jul;197(3):991-1006
pubmed: 24812306
Mol Ecol. 2020 Jan;29(2):262-271
pubmed: 31574563
Evolution. 2014 Dec;68(12):3555-69
pubmed: 25311368
Trends Ecol Evol. 2011 Jul;26(7):359-68
pubmed: 21507504
PLoS Biol. 2019 Jan 29;17(1):e3000118
pubmed: 30695026
Proc Natl Acad Sci U S A. 1973 Dec;70(12):3321-3
pubmed: 4519626
Proc Biol Sci. 2012 Dec 7;279(1748):4836-44
pubmed: 23034705
Evol Lett. 2018 Feb 10;2(2):52-61
pubmed: 30283664
Science. 2009 Nov 13;326(5955):998-1001
pubmed: 19797625
PLoS Biol. 2012;10(4):e1001308
pubmed: 22529744
Proc Natl Acad Sci U S A. 2005 May 3;102 Suppl 1:6527-34
pubmed: 15851669
Mol Ecol. 2015 Jul;24(14):3529-45
pubmed: 25943689
J Hered. 2017 Oct 30;108(7):780-790
pubmed: 29036624
J Evol Biol. 2020 Jun;33(6):738-750
pubmed: 32176391
J Evol Biol. 2016 Oct;29(10):1882-1904
pubmed: 27726237
Curr Biol. 2014 Oct 20;24(20):2423-7
pubmed: 25308078
Mol Biol Evol. 2014 Feb;31(2):474-83
pubmed: 24214537
Science. 2011 Nov 18;334(6058):972-4
pubmed: 22096197
Mol Ecol. 2019 Jun;28(11):2860-2871
pubmed: 31038811
Evolution. 2007 Dec;61(12):2750-71
pubmed: 17976181
Philos Trans R Soc Lond B Biol Sci. 2018 Oct 5;373(1757):
pubmed: 30150215
Nature. 2015 Dec 17;528(7582):405-8
pubmed: 26536110
Proc Biol Sci. 2019 Aug 14;286(1908):20191372
pubmed: 31409252
Nat Ecol Evol. 2019 Dec;3(12):1731-1742
pubmed: 31768021
Ann Hum Genet. 1956 May;20(4):309-11
pubmed: 13314400
Nat Commun. 2017 Dec 12;8(1):2072
pubmed: 29233985
Heredity (Edinb). 2011 Jun;106(6):994-1002
pubmed: 21119701
Am Nat. 1997 Jul;150(1):1-23
pubmed: 18811273
Proc Natl Acad Sci U S A. 2018 May 8;115(19):5028-5033
pubmed: 29686078
Trends Genet. 2014 Oct;30(10):453-63
pubmed: 25239223
Science. 2013 Mar 29;339(6127):1578-82
pubmed: 23413192
Nat Commun. 2016 Mar 18;7:10775
pubmed: 26988143
Mol Ecol. 2018 Sep;27(18):3572-3581
pubmed: 30055065
Mol Biol Evol. 2009 Dec;26(12):2755-64
pubmed: 19713326
Nat Rev Genet. 2017 Dec;18(12):721-730
pubmed: 29062057
G3 (Bethesda). 2019 Nov 5;9(11):3813-3824
pubmed: 31530636
Evol Lett. 2019 Apr 29;3(3):254-262
pubmed: 31171981
Elife. 2019 Mar 21;8:
pubmed: 30895926
Proc Biol Sci. 2012 Oct 22;279(1745):4296-302
pubmed: 22915670
J Evol Biol. 2017 Aug;30(8):1506-1508
pubmed: 28786185
Nat Rev Genet. 2010 Jul;11(7):459-63
pubmed: 20548291
Mol Ecol. 2015 Apr;24(8):1810-30
pubmed: 25753777
Methods Ecol Evol. 2017 Dec;8(12):1899-1909
pubmed: 29263778
PLoS Genet. 2011 Mar;7(3):e1001336
pubmed: 21437274
Nat Rev Genet. 2019 Mar;20(3):173-190
pubmed: 30581192
Ecol Lett. 2012 Mar;15(3):251-9
pubmed: 22248112
Mol Biol Evol. 2010 Jun;27(6):1226-34
pubmed: 20150340
Mol Ecol. 2020 Jun 14;:
pubmed: 32535981
Science. 1994 Sep 30;265(5181):2037-48
pubmed: 8091226
Biometrics. 2015 Dec;71(4):985-95
pubmed: 26228945
Evolution. 2011 Jul;65(7):2085-97
pubmed: 21729062
Am Nat. 2009 Dec;174(6):E218-29
pubmed: 19821744
PLoS Genet. 2016 Nov 15;12(11):e1006425
pubmed: 27846226
Genome Res. 2013 Sep;23(9):1514-21
pubmed: 23861382
Nature. 2012 Feb 08;482(7384):173-8
pubmed: 22318601
Evolution. 2018 Dec;72(12):2818-2824
pubmed: 30298925
Proc Biol Sci. 2019 Oct 23;286(1913):20191805
pubmed: 31615362
Philos Trans R Soc Lond B Biol Sci. 2018 Oct 5;373(1757):
pubmed: 30150219
Evolution. 2013 Apr;67(4):1189-95
pubmed: 23550766
Genes (Basel). 2019 Apr 25;10(4):
pubmed: 31027231
Am Nat. 2014 Feb;183(2):157-73
pubmed: 24464192
Evolution. 2009 Nov;63(11):2888-95
pubmed: 19573084
Trends Ecol Evol. 2009 May;24(5):280-8
pubmed: 19307043
BMC Biol. 2015 Jun 29;13:34
pubmed: 26032845
Heredity (Edinb). 2015 May;114(5):431-40
pubmed: 25269380
J Evol Biol. 2010 Sep 1;23(9):1989-97
pubmed: 20695965
PLoS Genet. 2013 Jun;9(6):e1003500
pubmed: 23754948
Evolution. 2009 Oct;63(10):2491-503
pubmed: 19519633
PLoS Genet. 2016 Sep 22;12(9):e1006170
pubmed: 27658217
PLoS Biol. 2010 Mar 16;8(3):e1000335
pubmed: 20305719
Genetics. 2015 Apr;199(4):991-1005
pubmed: 25672748
Evolution. 1980 Mar;34(2):292-305
pubmed: 28563426
Am J Hum Genet. 2011 Jan 7;88(1):76-82
pubmed: 21167468
Am Nat. 2019 Jan;193(1):93-105
pubmed: 30624102
PLoS Genet. 2016 Aug 18;12(8):e1006130
pubmed: 27536991
Heredity (Edinb). 2013 May;110(5):420-9
pubmed: 23512009
PLoS Genet. 2012;8(10):e1002905
pubmed: 23071443
Genetics. 2012 Apr;190(4):1477-89
pubmed: 22298707
Am Nat. 2016 Oct;188(4):379-97
pubmed: 27622873
Science. 1992 Jun 5;256(5062):1436-9
pubmed: 1604317
Proc Biol Sci. 2011 Jan 22;278(1703):161-9
pubmed: 20719776
Curr Biol. 2015 Jul 20;25(14):1860-6
pubmed: 26119752
Genes (Basel). 2019 Apr 18;10(4):
pubmed: 31003563
PLoS One. 2012;7(10):e46501
pubmed: 23077511
Genetics. 1977 Jan;85(1):171-83
pubmed: 838269
Genetics. 1962 Sep;47:1291-1300
pubmed: 13974344
Genetics. 2013 Jul;194(3):663-72
pubmed: 23733787
Mol Biol Evol. 1998 May;15(5):538-43
pubmed: 9580982
Proc Natl Acad Sci U S A. 2001 Feb 13;98(4):1671-5
pubmed: 11172009
Bioinformatics. 2011 Aug 1;27(15):2156-8
pubmed: 21653522
Proc Biol Sci. 2004 Apr 7;271(1540):705-14
pubmed: 15209104
Proc Natl Acad Sci U S A. 1998 May 26;95(11):6217-21
pubmed: 9600945
Evolution. 2014 Jul;68(7):2137-44
pubmed: 24641007
Genetics. 2013 Sep;195(1):205-20
pubmed: 23821598
Nature. 2004 May 6;429(6987):65-7
pubmed: 15129280
Nat Genet. 2017 Jul;49(7):986-992
pubmed: 28530675
Annu Rev Genet. 2013;47:97-120
pubmed: 24274750
Evolution. 2012 Jul;66(7):2106-16
pubmed: 22759288
J Evol Biol. 2015 Mar;28(3):723-9
pubmed: 25728593
Am Nat. 2009 Feb;173(2):176-87
pubmed: 19138156
Nat Genet. 2008 Mar;40(3):340-5
pubmed: 18246066
Ann N Y Acad Sci. 2009 Jun;1168:52-71
pubmed: 19566703
Hum Mol Genet. 2014 Oct 1;23(19):5251-9
pubmed: 24824216
Elife. 2019 Mar 21;8:
pubmed: 30895925
BMC Evol Biol. 2011 Jun 06;11:156
pubmed: 21645375
Mol Ecol Resour. 2020 Jun 16;:
pubmed: 32543001
Philos Trans R Soc Lond B Biol Sci. 2018 Oct 5;373(1757):
pubmed: 30150216
PLoS Genet. 2009 Jun;5(6):e1000500
pubmed: 19503611
Ann N Y Acad Sci. 2018 Jun;1422(1):65-87
pubmed: 29363779
J Evol Biol. 2011 Jun;24(6):1351-62
pubmed: 21507117
Am Nat. 2018 Aug;192(2):274-286
pubmed: 30016158
Evolution. 2017 Feb;71(2):458-464
pubmed: 27861813
PLoS One. 2008 May 14;3(5):e2187
pubmed: 18478127
Ann Eugen. 1951 Mar;15(4):323-54
pubmed: 24540312
Ecol Evol. 2014 Jun;4(11):2186-201
pubmed: 25360260
Nat Rev Genet. 2015 Oct;16(10):567-82
pubmed: 26347030
PLoS Biol. 2019 Apr 25;17(4):e3000244
pubmed: 31022179
Genetics. 2014 Jun;197(2):531-41
pubmed: 24578352
PLoS Med. 2015 Mar 31;12(3):e1001779
pubmed: 25826379
Mol Biol Evol. 2014 Apr;31(4):1040-55
pubmed: 24441104
Trends Ecol Evol. 2005 Aug;20(8):435-40
pubmed: 16701414
PLoS Genet. 2016 Jun 29;12(6):e1006166
pubmed: 27355579
Proc Biol Sci. 2016 Nov 30;283(1843):
pubmed: 27881743
Q Rev Biol. 2016 Sep;91(3):297-30
pubmed: 29558614
Evolution. 2012 Dec;66(12):3743-53
pubmed: 23206133
Genome Biol. 2019 Aug 15;20(1):169
pubmed: 31416462
New Phytol. 2011 Oct;192(2):542-52
pubmed: 21726233
Ecol Evol. 2019 Nov 07;9(23):13153-13173
pubmed: 31871636
Genetics. 1975 Jun;80(2):395
pubmed: 1132690
Evolution. 2013 Mar;67(3):908-17
pubmed: 23461340
G3 (Bethesda). 2016 Aug 09;6(8):2273-84
pubmed: 27226163
Evolution. 2017 Apr;71(4):1096-1105
pubmed: 28067418
Evol Lett. 2017 Aug 23;1(4):222-228
pubmed: 30283651
Nat Ecol Evol. 2019 Dec;3(12):1725-1730
pubmed: 31740847
Genet Sel Evol. 2009 Jan 21;41:15
pubmed: 19284519
Proc Natl Acad Sci U S A. 2019 Feb 5;116(6):2158-2164
pubmed: 30598449
Nature. 1996 May 16;381(6579):232-4
pubmed: 8622764
Evolution. 2010 May;64(5):1510-6
pubmed: 19922443
Nat Commun. 2014 Mar 18;5:3482
pubmed: 24637641
Bioinformatics. 2010 Mar 15;26(6):841-2
pubmed: 20110278
Genetics. 2016 Jun;203(2):699-714
pubmed: 27098910
Evolution. 2006 Nov;60(11):2218-25
pubmed: 17236415
Am Nat. 2018 Aug;192(2):241-249
pubmed: 30016160
Proc Biol Sci. 2011 Mar 22;278(1707):855-62
pubmed: 20861051
Genome Biol Evol. 2016 Jun 02;8(5):1489-500
pubmed: 27189992
PLoS Biol. 2019 Feb 4;17(2):e3000128
pubmed: 30716062
Genetics. 1973 May;74(1):175-95
pubmed: 4711903
BMC Evol Biol. 2016 May 13;16:88
pubmed: 27175796
Evolution. 2018 Oct;72(10):2181-2201
pubmed: 30109706
Nat Ecol Evol. 2018 Apr;2(4):705-712
pubmed: 29459709
Evolution. 2013 Mar;67(3):708-21
pubmed: 23461322
PLoS Genet. 2014 Aug 21;10(8):e1004561
pubmed: 25144706
Genetics. 1975 Dec;81(4):775-85
pubmed: 1213275