Multiomic analysis and immunoprofiling reveal distinct subtypes of human angiosarcoma.


Journal

The Journal of clinical investigation
ISSN: 1558-8238
Titre abrégé: J Clin Invest
Pays: United States
ID NLM: 7802877

Informations de publication

Date de publication:
02 11 2020
Historique:
received: 13 04 2020
accepted: 29 07 2020
pubmed: 6 10 2020
medline: 17 2 2021
entrez: 5 10 2020
Statut: ppublish

Résumé

Angiosarcomas are rare, clinically aggressive tumors with limited treatment options and a dismal prognosis. We analyzed angiosarcomas from 68 patients, integrating information from multiomic sequencing, NanoString immuno-oncology profiling, and multiplex immunohistochemistry and immunofluorescence for tumor-infiltrating immune cells. Through whole-genome sequencing (n = 18), 50% of the cutaneous head and neck angiosarcomas exhibited higher tumor mutation burden (TMB) and UV mutational signatures; others were mutationally quiet and non-UV driven. NanoString profiling revealed 3 distinct patient clusters represented by lack (clusters 1 and 2) or enrichment (cluster 3) of immune-related signaling and immune cells. Neutrophils (CD15+), macrophages (CD68+), cytotoxic T cells (CD8+), Tregs (FOXP3+), and PD-L1+ cells were enriched in cluster 3 relative to clusters 2 and 1. Likewise, tumor inflammation signature (TIS) scores were highest in cluster 3 (7.54 vs. 6.71 vs. 5.75, respectively; P < 0.0001). Head and neck angiosarcomas were predominant in clusters 1 and 3, providing the rationale for checkpoint immunotherapy, especially in the latter subgroup with both high TMB and TIS scores. Cluster 2 was enriched for secondary angiosarcomas and exhibited higher expression of DNMT1, BRD3/4, MYC, HRAS, and PDGFRB, in keeping with the upregulation of epigenetic and oncogenic signaling pathways amenable to targeted therapies. Molecular and immunological dissection of angiosarcomas may provide insights into opportunities for precision medicine.

Identifiants

pubmed: 33016928
pii: 139080
doi: 10.1172/JCI139080
pmc: PMC7598061
doi:
pii:

Substances chimiques

Neoplasm Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

5833-5846

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Auteurs

Jason Yongsheng Chan (JY)

Division of Medical Oncology, National Cancer Centre Singapore, Singapore.
Cancer Science Institute of Singapore, National University of Singapore, Singapore.
SingHealth Duke-NUS Blood Cancer Centre, Singapore.

Jing Quan Lim (JQ)

Lymphoma Genomic Translational Research Laboratory, Division of Cellular and Molecular Research, National Cancer Centre Singapore, Singapore.

Joe Yeong (J)

Department of Anatomical Pathology, Singapore General Hospital, Singapore.
Institute of Molecular and Cell Biology, Singapore.

Vinod Ravi (V)

Department of Sarcoma Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Peiyong Guan (P)

Integrated Biostatistics and Bioinformatics Programme.

Arnoud Boot (A)

Integrated Biostatistics and Bioinformatics Programme.
Centre for Computational Biology, and.

Timothy Kwang Yong Tay (TKY)

Department of Anatomical Pathology, Singapore General Hospital, Singapore.

Sathiyamoorthy Selvarajan (S)

Department of Anatomical Pathology, Singapore General Hospital, Singapore.

Nur Diyana Md Nasir (ND)

Department of Anatomical Pathology, Singapore General Hospital, Singapore.

Jie Hua Loh (JH)

Department of Anatomical Pathology, Singapore General Hospital, Singapore.

Choon Kiat Ong (CK)

Lymphoma Genomic Translational Research Laboratory, Division of Cellular and Molecular Research, National Cancer Centre Singapore, Singapore.
Program in Cancer and Stem Cell Biology, Duke-NUS Medical School, Singapore.

Dachuan Huang (D)

Lymphoma Genomic Translational Research Laboratory, Division of Cellular and Molecular Research, National Cancer Centre Singapore, Singapore.

Jing Tan (J)

Laboratory of Cancer Epigenome, Division of Medical Sciences National Cancer Centre Singapore, Singapore.

Zhimei Li (Z)

Laboratory of Cancer Epigenome, Division of Medical Sciences National Cancer Centre Singapore, Singapore.

Cedric Chuan-Young Ng (CC)

Laboratory of Cancer Epigenome, Division of Medical Sciences National Cancer Centre Singapore, Singapore.

Thuan Tong Tan (TT)

Department of Infectious Diseases, Singapore General Hospital, Singapore.

Mikio Masuzawa (M)

Department of Regulation Biochemistry, School of Allied Health Sciences, Kitasato University, Minato City, Tokyo, Japan.

Ken Wing-Kin Sung (KW)

Genome Institute of Singapore, A*STAR, Singapore.
School of Computing, National University of Singapore, Singapore.

Mohamad Farid (M)

Division of Medical Oncology, National Cancer Centre Singapore, Singapore.
SingHealth Duke-NUS Blood Cancer Centre, Singapore.

Richard Hong Hui Quek (RHH)

Division of Medical Oncology, National Cancer Centre Singapore, Singapore.

Ngian Chye Tan (NC)

Division of Surgical Oncology, National Cancer Centre Singapore, Singapore.
SingHealth Duke-NUS Head and Neck Centre, Singapore.

Melissa Ching Ching Teo (MCC)

Division of Surgical Oncology, National Cancer Centre Singapore, Singapore.

Steven George Rozen (SG)

Integrated Biostatistics and Bioinformatics Programme.
Centre for Computational Biology, and.
Program in Cancer and Stem Cell Biology, Duke-NUS Medical School, Singapore.

Patrick Tan (P)

Cancer Science Institute of Singapore, National University of Singapore, Singapore.
Institute of Molecular and Cell Biology, Singapore.
Program in Cancer and Stem Cell Biology, Duke-NUS Medical School, Singapore.
Genome Institute of Singapore, A*STAR, Singapore.

Andrew Futreal (A)

Department of Genomic Medicine, University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Bin Tean Teh (BT)

Cancer Science Institute of Singapore, National University of Singapore, Singapore.
Institute of Molecular and Cell Biology, Singapore.
Program in Cancer and Stem Cell Biology, Duke-NUS Medical School, Singapore.
Laboratory of Cancer Epigenome, Division of Medical Sciences National Cancer Centre Singapore, Singapore.
Division of Cellular and Molecular Research, National Cancer Centre Singapore.

Khee Chee Soo (KC)

Division of Surgical Oncology, National Cancer Centre Singapore, Singapore.
SingHealth Duke-NUS Head and Neck Centre, Singapore.

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