Inter-Subject Clustering of Brain Fibers from Whole-Brain Tractography.


Journal

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
ISSN: 2694-0604
Titre abrégé: Annu Int Conf IEEE Eng Med Biol Soc
Pays: United States
ID NLM: 101763872

Informations de publication

Date de publication:
07 2020
Historique:
entrez: 6 10 2020
pubmed: 7 10 2020
medline: 24 10 2020
Statut: ppublish

Résumé

This work presents an effective multiple subject clustering method using whole-brain tractography datasets. The method is able to obtain fiber clusters that are representative of the population. The proposed approach first applies a fast intra-subject clustering algorithm on each subject obtaining the cluster centroids for all subjects. Second, it compresses the collection of centroids to a latent space through the encoder of a trained autoencoder. Finally, it uses a modified HDBSCAN with adjusted parameters on the encoded centroids of all subjects to obtain the final inter-subject clusters. The results shows that the proposed method outperforms other clustering strategies, and it is able to retrieve known fascicles in a reasonable execution time, achieving a precision over 87% and F1 score above 86% on a collection of 20 simulated subjects.

Identifiants

pubmed: 33018321
doi: 10.1109/EMBC44109.2020.9175342
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1687-1691

Auteurs

Articles similaires

Selecting optimal software code descriptors-The case of Java.

Yegor Bugayenko, Zamira Kholmatova, Artem Kruglov et al.
1.00
Software Algorithms Programming Languages
1.00
Humans Magnetic Resonance Imaging Brain Infant, Newborn Infant, Premature
alpha-Synuclein Humans Animals Mice Lewy Body Disease
Humans Algorithms Software Artificial Intelligence Computer Simulation

Classifications MeSH