Inter-Subject Clustering of Brain Fibers from Whole-Brain Tractography.
Journal
Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
ISSN: 2694-0604
Titre abrégé: Annu Int Conf IEEE Eng Med Biol Soc
Pays: United States
ID NLM: 101763872
Informations de publication
Date de publication:
07 2020
07 2020
Historique:
entrez:
6
10
2020
pubmed:
7
10
2020
medline:
24
10
2020
Statut:
ppublish
Résumé
This work presents an effective multiple subject clustering method using whole-brain tractography datasets. The method is able to obtain fiber clusters that are representative of the population. The proposed approach first applies a fast intra-subject clustering algorithm on each subject obtaining the cluster centroids for all subjects. Second, it compresses the collection of centroids to a latent space through the encoder of a trained autoencoder. Finally, it uses a modified HDBSCAN with adjusted parameters on the encoded centroids of all subjects to obtain the final inter-subject clusters. The results shows that the proposed method outperforms other clustering strategies, and it is able to retrieve known fascicles in a reasonable execution time, achieving a precision over 87% and F1 score above 86% on a collection of 20 simulated subjects.
Identifiants
pubmed: 33018321
doi: 10.1109/EMBC44109.2020.9175342
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM