Antibiotic Resistance and Mobile Genetic Elements in Extensively Drug-Resistant

carbapenem resistance, carbapenemase, whole genome sequencing, long reads, plasmid, Klebsiella pneumoniae, extensively drug-resistant, molecular typing

Journal

Antibiotics (Basel, Switzerland)
ISSN: 2079-6382
Titre abrégé: Antibiotics (Basel)
Pays: Switzerland
ID NLM: 101637404

Informations de publication

Date de publication:
05 Oct 2020
Historique:
received: 17 09 2020
revised: 01 10 2020
accepted: 02 10 2020
entrez: 8 10 2020
pubmed: 9 10 2020
medline: 9 10 2020
Statut: epublish

Résumé

Mobile genetic elements (MGEs), especially multidrug-resistance plasmids, are major vehicles for the dissemination of antimicrobial resistance determinants. Herein, we analyse the MGEs in three extensively drug-resistant (XDR)

Identifiants

pubmed: 33028048
pii: antibiotics9100675
doi: 10.3390/antibiotics9100675
pmc: PMC7600919
pii:
doi:

Types de publication

Journal Article

Langues

eng

Références

J Antimicrob Chemother. 2007 Jun;59(6):1071-5
pubmed: 17434878
Bioinformatics. 2016 Apr 1;32(7):1009-15
pubmed: 26589280
FEMS Microbiol Rev. 2017 May 1;41(3):252-275
pubmed: 28521338
Antimicrob Agents Chemother. 2020 Sep 21;64(10):
pubmed: 32747358
J Clin Microbiol. 2015 Dec;53(12):3788-97
pubmed: 26400782
J Antimicrob Chemother. 2012 Nov;67(11):2640-4
pubmed: 22782487
J Antimicrob Chemother. 2018 Jul 1;73(7):1796-1803
pubmed: 29648629
Antimicrob Agents Chemother. 2005 Aug;49(8):3541-3
pubmed: 16048979
Antimicrob Agents Chemother. 2016 Nov 21;60(12):7245-7251
pubmed: 27671058
Antimicrob Agents Chemother. 2017 Mar 24;61(4):
pubmed: 28167556
Antimicrob Agents Chemother. 2012 Jan;56(1):559-62
pubmed: 22083465
Clin Microbiol Rev. 2019 Nov 13;33(1):
pubmed: 31722889
Diagn Microbiol Infect Dis. 2015 Jul;82(3):240-4
pubmed: 25865067
Microb Genom. 2019 Sep;5(9):
pubmed: 31389782
PLoS One. 2010 Jun 18;5(6):e11202
pubmed: 20585456
Antimicrob Agents Chemother. 2011 Oct;55(10):4896-9
pubmed: 21768505
J Antimicrob Chemother. 2013 Jan;68(1):34-9
pubmed: 22969080
J Med Microbiol. 2016 Oct;65(10):1111-1118
pubmed: 27542822
Bioinformatics. 2016 Nov 15;32(22):3380-3387
pubmed: 27466620
Microbiol Mol Biol Rev. 2014 Mar;78(1):1-39
pubmed: 24600039
Int J Med Microbiol. 2013 Aug;303(6-7):298-304
pubmed: 23499304
J Antimicrob Chemother. 2017 Oct 1;72(10):2737-2744
pubmed: 29091199
Euro Surveill. 2019 Dec;24(50):
pubmed: 31847948
Mob Genet Elements. 2013 Jan 1;3(1):e23463
pubmed: 23734294
BMC Microbiol. 2017 Apr 27;17(1):101
pubmed: 28449650
Euro Surveill. 2015;20(45):
pubmed: 26675038
J Bacteriol. 2004 Mar;186(6):1818-32
pubmed: 14996813
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595
pubmed: 28594827
PLoS One. 2017 Dec 8;12(12):e0189438
pubmed: 29220374
Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):E3574-81
pubmed: 26100894
Genome Res. 2017 May;27(5):722-736
pubmed: 28298431
Antimicrob Agents Chemother. 2018 Jun 26;62(7):
pubmed: 29661874
J Antimicrob Chemother. 2009 Feb;63(2):274-81
pubmed: 19001452
Clin Microbiol Rev. 2018 Aug 1;31(4):
pubmed: 30068738
Int J Antimicrob Agents. 2013 Apr;41(4):325-9
pubmed: 23305656
J Antimicrob Chemother. 2016 Nov;71(11):3081-3089
pubmed: 27494913
Antimicrob Agents Chemother. 2014 Jul;58(7):3895-903
pubmed: 24777092
J Clin Microbiol. 2018 May 25;56(6):
pubmed: 29618504
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Antimicrob Agents Chemother. 2017 Jun 27;61(7):
pubmed: 28461314
Antimicrob Resist Infect Control. 2018 May 2;7:62
pubmed: 29744043
Bioinformatics. 2011 Apr 1;27(7):1009-10
pubmed: 21278367
Nat Microbiol. 2019 Nov;4(11):1919-1929
pubmed: 31358985
Clin Microbiol Infect. 2019 Aug;25(8):1013-1020
pubmed: 30641228

Auteurs

Kyriaki Xanthopoulou (K)

Institute for Medical Microbiology, Immunology and Hygiene, University of Cologne, 50935 Cologne, Germany.
German Centre for Infection Research (DZIF), Partner site Bonn-Cologne, 50935 Cologne, Germany.

Alessandra Carattoli (A)

Department of Molecular Medicine, Sapienza University of Rome, 00185 Rome, Italy.

Julia Wille (J)

Institute for Medical Microbiology, Immunology and Hygiene, University of Cologne, 50935 Cologne, Germany.
German Centre for Infection Research (DZIF), Partner site Bonn-Cologne, 50935 Cologne, Germany.

Lena M Biehl (LM)

German Centre for Infection Research (DZIF), Partner site Bonn-Cologne, 50935 Cologne, Germany.
Department I of Internal Medicine, Faculty of Medicine and University Hospital of Cologne, University of Cologne, 50937 Cologne, Germany.

Holger Rohde (H)

Institute for Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf, 20246 Hamburg, Germany.
German Centre for Infection Research, Partner site Hamburg-Lübeck-Borstel, 20246 Hamburg, Germany.

Fedja Farowski (F)

German Centre for Infection Research (DZIF), Partner site Bonn-Cologne, 50935 Cologne, Germany.
Department I of Internal Medicine, Faculty of Medicine and University Hospital of Cologne, University of Cologne, 50937 Cologne, Germany.
Department of Internal Medicine II, Infectious Diseases, University Hospital Frankfurt, Goethe University Frankfurt, 60590 Frankfurt am Main, Germany.

Oleg Krut (O)

Paul-Ehrlich Institute, Federal Institute for Vaccines and Biomedicine, 63225 Langen, Germany.

Laura Villa (L)

Department of Infectious Diseases, Istituto Superiore di Sanità, 00161 Rome, Italy.

Claudia Feudi (C)

Institute of Microbiology and Epizootics, Centre for Infection Medicine, Department of Veterinary Medicine, Freie Universität Berlin, 14163 Berlin, Germany.

Harald Seifert (H)

Institute for Medical Microbiology, Immunology and Hygiene, University of Cologne, 50935 Cologne, Germany.
German Centre for Infection Research (DZIF), Partner site Bonn-Cologne, 50935 Cologne, Germany.

Paul G Higgins (PG)

Institute for Medical Microbiology, Immunology and Hygiene, University of Cologne, 50935 Cologne, Germany.
German Centre for Infection Research (DZIF), Partner site Bonn-Cologne, 50935 Cologne, Germany.

Classifications MeSH