A natural diversity screen in Arabidopsis thaliana reveals determinants for HopZ1a recognition in the ZAR1-ZED1 immune complex.


Journal

Plant, cell & environment
ISSN: 1365-3040
Titre abrégé: Plant Cell Environ
Pays: United States
ID NLM: 9309004

Informations de publication

Date de publication:
02 2021
Historique:
received: 06 08 2020
revised: 15 10 2020
accepted: 20 10 2020
pubmed: 27 10 2020
medline: 6 7 2021
entrez: 26 10 2020
Statut: ppublish

Résumé

Pathogen pressure on hosts can lead to the evolution of genes regulating the innate immune response. By characterizing naturally occurring polymorphisms in immune receptors, we can better understand the molecular determinants of pathogen recognition. ZAR1 is an ancient Arabidopsis thaliana NLR (Nucleotide-binding [NB] Leucine-rich-repeat [LRR] Receptor) that recognizes multiple secreted effector proteins from the pathogenic bacteria Pseudomonas syringae and Xanthomonas campestris through its interaction with receptor-like cytoplasmic kinases (RLCKs). ZAR1 was first identified for its role in recognizing P. syringae effector HopZ1a, through its interaction with the RLCK ZED1. To identify additional determinants of HopZ1a recognition, we performed a computational screen for ecotypes from the 1001 Genomes project that were likely to lack HopZ1a recognition, and tested ~300 ecotypes. We identified ecotypes containing polymorphisms in ZAR1 and ZED1. Using our previously established Nicotiana benthamiana transient assay and Arabidopsis ecotypes, we tested for the effect of naturally occurring polymorphisms on ZAR1 interactions and the immune response. We identified key residues in the NB or LRR domain of ZAR1 that impact the interaction with ZED1. We demonstrate that natural diversity combined with functional assays can help define the molecular determinants and interactions necessary to regulate immune induction in response to pathogens.

Identifiants

pubmed: 33103794
doi: 10.1111/pce.13927
doi:

Substances chimiques

Arabidopsis Proteins 0
Carrier Proteins 0
ZAR1 protein, Arabidopsis 0
ZED1 protein, Arabidopsis 0
Phosphotransferases EC 2.7.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

629-644

Informations de copyright

© 2020 John Wiley & Sons Ltd.

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Auteurs

Maël Baudin (M)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.

Eliza C Martin (EC)

Department of Bioinformatics and Structural Biochemistry, Institute of Biochemistry of the Romanian Academy, Bucharest, Romania.

Chodon Sass (C)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.

Jana A Hassan (JA)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.

Claire Bendix (C)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.

Rolin Sauceda (R)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.

Nathan Diplock (N)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.

Chelsea D Specht (CD)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.
School of Integrative Plant Science, Section of Plant Biology and the L.H. Bailey Hortorium, Cornell University, Ithaca, New York, USA.

Andrei J Petrescu (AJ)

Department of Bioinformatics and Structural Biochemistry, Institute of Biochemistry of the Romanian Academy, Bucharest, Romania.

Jennifer D Lewis (JD)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.
Plant Gene Expression Center, United States Department of Agriculture, Albany, California, USA.

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