Major discrepancy between factual antibiotic resistance and consumption in South of France: analysis of 539,037 bacterial strains.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
26 10 2020
Historique:
received: 17 01 2020
accepted: 21 04 2020
entrez: 27 10 2020
pubmed: 28 10 2020
medline: 13 3 2021
Statut: epublish

Résumé

The burden of antibiotic resistance is currently estimated by mathematical modeling, without real count of resistance to key antibiotics. Here we report the real rate of resistance to key antibiotics in bacteria isolated from humans during a 5 years period in a large area in southeast in France. We conducted a retrospective study on antibiotic susceptibility of 539,107 clinical strains isolated from hospital and private laboratories in south of France area from January 2014 to January 2019. The resistance rate to key antibiotics as well as the proportion of bacteria classified as Difficult-to-Treat (DTR) were determined and compared with the Mann-Whitney U test, the χ

Identifiants

pubmed: 33106494
doi: 10.1038/s41598-020-75158-7
pii: 10.1038/s41598-020-75158-7
pmc: PMC7588456
doi:

Substances chimiques

Anti-Bacterial Agents 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

18262

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Auteurs

Ousmane Oumou Diallo (OO)

Aix Marseille Univ, IRD, APHM, MEPHI, IHU Méditerranée Infection, Faculté de Médecine Et de Pharmacie, 19-21 boulevard Jean Moulin, 13385, Marseille Cedex 05, France.
MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.

Sophie Alexandra Baron (SA)

Aix Marseille Univ, IRD, APHM, MEPHI, IHU Méditerranée Infection, Faculté de Médecine Et de Pharmacie, 19-21 boulevard Jean Moulin, 13385, Marseille Cedex 05, France.
MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.

Gregory Dubourg (G)

Aix Marseille Univ, IRD, APHM, MEPHI, IHU Méditerranée Infection, Faculté de Médecine Et de Pharmacie, 19-21 boulevard Jean Moulin, 13385, Marseille Cedex 05, France.
MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.

Hervé Chaudet (H)

MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.
VITROME, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.

Philippe Halfon (P)

LBM Alphabio, Marseille, France.

Sabine Camiade (S)

LBM Alphabio, Marseille, France.

Béatrice Comte (B)

LBM Bioesterel, Cannes, France.

Stéphanie Joubert (S)

LBM Bioesterel, Cannes, France.

Arnaud François (A)

LBM Bioesterel, Cannes, France.

Philippe Seyral (P)

LBM Labazur, Nice, France.

François Parisot (F)

LBM Labazur, Nice, France.

Jean-Paul Casalta (JP)

VITROME, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.
LBM Labazur, Provence, France.

Raymond Ruimy (R)

Laboratoire de bactériologie, CHU, Nice, France.

Christophe Maruejouls (C)

LBM Barla, Nice, France.

Jean-Christophe Achiardy (JC)

LBM Barla, Nice, France.

Sophie Burignat (S)

LBM Cerballiance, Marseille, France.

Joseph Carvajal (J)

LBM Cerballiance, Marseille, France.

Edouard Delaunay (E)

LBM Cerballiance, Marseille, France.

Sandra Meyer (S)

LBM Cerballiance, Marseille, France.

Pierre-Yves Levy (PY)

VITROME, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.
LBM, Casamance, Aubagne, France.

Patricia Roussellier (P)

Laboratoire de microbiologie, CH, Salon de Provence, France.

Patrick Brunet (P)

Laboratoire de microbiologie, CH Saint-Joseph, Marseille, France.

Claude Bosi (C)

Laboratoire de microbiologie, CH, Aubagne, France.

Philippe Stolidi (P)

Laboratoire de microbiologie, CH, Aubagne, France.

Jean-Pierre Arzouni (JP)

VITROME, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.
LBM, Labosud Provence Biologie, Marseille, France.

Gisele Gay (G)

LBM, Labosud Provence Biologie, Marseille, France.

Pierre Hance (P)

LBM, Labosud Provence Biologie, Marseille, France.

Philippe Colson (P)

Aix Marseille Univ, IRD, APHM, MEPHI, IHU Méditerranée Infection, Faculté de Médecine Et de Pharmacie, 19-21 boulevard Jean Moulin, 13385, Marseille Cedex 05, France.
MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France.

Didier Raoult (D)

Aix Marseille Univ, IRD, APHM, MEPHI, IHU Méditerranée Infection, Faculté de Médecine Et de Pharmacie, 19-21 boulevard Jean Moulin, 13385, Marseille Cedex 05, France. didier.raoult@gmail.com.
MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France. didier.raoult@gmail.com.

Jean-Marc Rolain (JM)

Aix Marseille Univ, IRD, APHM, MEPHI, IHU Méditerranée Infection, Faculté de Médecine Et de Pharmacie, 19-21 boulevard Jean Moulin, 13385, Marseille Cedex 05, France. jean-marc.rolain@univ-amu.fr.
MEPHI, Aix Marseille Université, IHU Méditerranée Infection, AP-HM, Marseille, France. jean-marc.rolain@univ-amu.fr.

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