An electrochemical biosensor for the detection of Mycobacterium tuberculosis DNA from sputum and urine samples.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2020
Historique:
received: 01 04 2020
accepted: 08 10 2020
entrez: 28 10 2020
pubmed: 29 10 2020
medline: 15 12 2020
Statut: epublish

Résumé

Tuberculosis (TB) is a major global public health problem with high mortality and morbidity. In low-middle income countries (LMIC) a large number of respiratory symptomatic cases that require TB screening per year demands more accurate, fast and affordable testing for TB diagnostics. Sputum smear is the initial screening test in LMICs, however, its sensitivity is limited in patients with low sputum bacilli load. The same limitation is observed in the currently available molecular tests. We designed, standardized and evaluated an electrochemical biosensor that detects the highly specific DNA insertion element 6110 (IS6110). A PCR amplified DNA product is hybridized on the surface of the working electrode built on FTO-Glass with immobilized specific DNA probes, after which cyclic voltammetry is performed with an Ag/AgCl reference electrode and a platinum counter electrode. The response of the sensor was measured by the ratio (cathodic peak current of the hybridized sensor) / (cathodic peak current of the non-hybridized sensor). We tested the biosensor, using positive hybridization control sequences, genomic DNA extracted from M. tuberculosis strains and sputum of TB patients, and extracted DNA from the urine of healthy controls spiked with M. tuberculosis DNA. This biosensor was effective for the detection of M. tuberculosis DNA with a detection limit of 16 fM in sputum sample and 1 fM in spiked urine samples. The low cost and the relatively brief duration of the assay make this an important TB screening tool in the fight against tuberculosis.

Identifiants

pubmed: 33112923
doi: 10.1371/journal.pone.0241067
pii: PONE-D-20-08686
pmc: PMC7592764
doi:

Substances chimiques

DNA, Bacterial 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0241067

Subventions

Organisme : Medical Research Council
ID : MR/K007467/1
Pays : United Kingdom
Organisme : FIC NIH HHS
ID : R25 TW009720
Pays : United States
Organisme : Wellcome Trust
ID : 99805/Z/12/Z
Pays : United Kingdom

Déclaration de conflit d'intérêts

The authors of this paper have read the journal's policy and have the following competing interests: JR and RL are paid employees of NDT Innovations Inc. There are no patents, products in development or marketed products associated with this research to declare. This does not alter our adherence to PLOS ONE policies on sharing data and materials.

Références

N Engl J Med. 2010 Sep 9;363(11):1005-15
pubmed: 20825313
J Clin Microbiol. 2011 Apr;49(4):1202-5
pubmed: 21270230
Clin Dev Immunol. 2011;2011:193963
pubmed: 21437177
N Engl J Med. 2015 May 28;372(22):2127-35
pubmed: 26017823
J Microbiol Methods. 2017 May;136:65-70
pubmed: 28285168
Expert Rev Mol Diagn. 2014 Mar;14(2):225-44
pubmed: 24524681
Eur J Clin Microbiol Infect Dis. 2005 Jul;24(7):499-500
pubmed: 15986232
Tuberculosis (Edinb). 2007 Sep;87(5):393-404
pubmed: 17627889
Biochem Res Int. 2016;2016:3130469
pubmed: 27042353
Lab Chip. 2009 Aug 7;9(15):2123-31
pubmed: 19606287
PLoS Genet. 2018 Apr 12;14(4):e1007282
pubmed: 29649213
Science. 1995 Mar 17;267(5204):1629-32
pubmed: 17808180
Anal Chim Acta. 2016 Oct 5;939:108-116
pubmed: 27639149
Eur J Clin Microbiol Infect Dis. 2000 Oct;19(10):750-4
pubmed: 11117638
Sensors (Basel). 2015 Jun 19;15(6):14539-68
pubmed: 26102488
Acc Chem Res. 2010 Apr 20;43(4):496-505
pubmed: 20201486
PLoS Negl Trop Dis. 2013 Dec 12;7(12):e2593
pubmed: 24349599
Biosens Bioelectron. 2010 Dec 15;26(4):1205-17
pubmed: 20855190
Cochrane Database Syst Rev. 2014 Jan 21;(1):CD009593
pubmed: 24448973
Biosens Bioelectron. 2016 Apr 15;78:483-488
pubmed: 26657592
Anal Chem. 2009 Mar 15;81(6):2150-8
pubmed: 19215066
Clin Chem. 2000 Aug;46(8 Pt 1):1078-84
pubmed: 10926886
Tuberc Respir Dis (Seoul). 2015 Apr;78(2):64-71
pubmed: 25861338
Anal Chem. 2009 Jul 1;81(13):5291-8
pubmed: 19489595
J Clin Microbiol. 2016 Jun;54(6):1434-1441
pubmed: 26984977
Nat Biotechnol. 2003 Oct;21(10):1192-9
pubmed: 14520405

Auteurs

Daniel Ramos-Sono (D)

Laboratorio de Bioinformática y Biología Molecular, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Perú.

Raúl Laureano (R)

Laboratorio de Bioinformática y Biología Molecular, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Perú.

Daniel Rueda (D)

Laboratorio de Bioinformática y Biología Molecular, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Perú.

Robert H Gilman (RH)

Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.

Adolfo La Rosa (A)

Laboratorio de Electroquímica, Facultad de Ciencias, Universidad Nacional de Ingeniería, Lima, Perú.

Jesús Ruiz (J)

Laboratorio de Metalurgia y Ciencias de Materiales, NDT Innovations, Inc., Lima, Perú.

Raúl León (R)

Laboratorio de Metalurgia y Ciencias de Materiales, NDT Innovations, Inc., Lima, Perú.

Patricia Sheen (P)

Laboratorio de Bioinformática y Biología Molecular, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Perú.

Mirko Zimic (M)

Laboratorio de Bioinformática y Biología Molecular, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Perú.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH