Performance of GeneXpert ultra in the diagnosis of Tuberculous Cervical lymphadenitis in formalin fixed paraffin embedded tissues.


Journal

Tuberculosis (Edinburgh, Scotland)
ISSN: 1873-281X
Titre abrégé: Tuberculosis (Edinb)
Pays: Scotland
ID NLM: 100971555

Informations de publication

Date de publication:
12 2020
Historique:
received: 02 08 2020
revised: 15 10 2020
accepted: 18 10 2020
pubmed: 1 11 2020
medline: 3 11 2021
entrez: 31 10 2020
Statut: ppublish

Résumé

The diagnosis of Tuberculous Cervical lymphadenitis (TCL) is challenging. The present study aimed to assess the performance of GeneXpert ultra (GXu) in the diagnosis of TCL on Formalin Fixed, Paraffin Embedded Tissues (FFPET). This study included 35 TCL cases confirmed by positive microbiology and/or positive GXu on Fresh Tissues (FT). The diagnostic performance parameters of GXu on FFPET were determined with reference to microbiology (positive Ziehl Neelsen and/or positive culture) and with reference to positive microbiology and/or positive GXu on FT. The GXu on FFPET was positive in 26/35 (74%) cases. With reference to positive ZN and or culture, the sensitivity, specificity, positive predictive value, and negative predictive value of GXu on FFPET were 63%, 100%, 100% and 71% respectively. With reference to positive microbiology and/or positive GXu on FT, these rates were 74%, 100%, 100% and 40% respectively. GXu on FFPET is a reliable tool for the detection of Mycobacterium tuberculosis complex particularly for cases where microbiological investigations have not been performed.

Identifiants

pubmed: 33128936
pii: S1472-9792(20)30179-7
doi: 10.1016/j.tube.2020.102012
pii:
doi:

Substances chimiques

DNA, Bacterial 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

102012

Informations de copyright

Copyright © 2020 Elsevier Ltd. All rights reserved.

Auteurs

Emna Romdhane (E)

Department of Pathology, Charles Nicolle Hospital, Tunis, Tunisia; UR17ES15, Faculté de Médecine de Tunis, Université de Tunis El Manar, Tunis, Tunisia. Electronic address: emnaromdhane90@gmail.com.

Amira Arfaoui (A)

Department of Pathology, Charles Nicolle Hospital, Tunis, Tunisia; UR17ES15, Faculté de Médecine de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Chaouki Benabdessalem (C)

Laboratory of Transmission, Control and Immunobiology of Infection - LR11IPT-02, Institut Pasteur de Tunis, Tunisia, University Tunis El Manar, Tunisia.

Meriam Ksentini (M)

Department of Pathology, Charles Nicolle Hospital, Tunis, Tunisia; UR17ES15, Faculté de Médecine de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Asma Ferjani (A)

Université de Tunis El Manar, Faculté de Médecine de Tunis, Laboratoire de Recherche "Résistance aux antibiotiques" LR99ES09, Hôpital Charles Nicolle, Laboratoire de microbiologie, 1007, Tunis, Tunisia.

Neira Dekhil (N)

Unit of Typing and Genetics of Mycobacteria, Laboratory of Molecular Microbiology, Vaccinology, and Biotechnology Development, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunisia.

Rim Lahiani (R)

Department of Ear Nose and Throat, Charles Nicolle Hospital, Tunis, Tunisia.

Soumaya Bchiri (S)

Laboratory of Transmission, Control and Immunobiology of Infection - LR11IPT-02, Institut Pasteur de Tunis, Tunisia, University Tunis El Manar, Tunisia.

Helmi Mardassi (H)

Unit of Typing and Genetics of Mycobacteria, Laboratory of Molecular Microbiology, Vaccinology, and Biotechnology Development, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunisia.

Mohamed-Ridha Barbouche (MR)

Laboratory of Transmission, Control and Immunobiology of Infection - LR11IPT-02, Institut Pasteur de Tunis, Tunisia, University Tunis El Manar, Tunisia.

Ilhem Boutiba Ben Boubake (I)

Université de Tunis El Manar, Faculté de Médecine de Tunis, Laboratoire de Recherche "Résistance aux antibiotiques" LR99ES09, Hôpital Charles Nicolle, Laboratoire de microbiologie, 1007, Tunis, Tunisia.

Mamia Ben Salah (M)

Department of Ear Nose and Throat, Charles Nicolle Hospital, Tunis, Tunisia.

Soumaya Rammeh (S)

Department of Pathology, Charles Nicolle Hospital, Tunis, Tunisia; UR17ES15, Faculté de Médecine de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

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Classifications MeSH