Baseline phenotype and 30-day outcomes of people tested for COVID-19: an international network cohort including >3.32 million people tested with real-time PCR and >219,000 tested positive for SARS-CoV-2 in South Korea, Spain and the United States.


Journal

medRxiv : the preprint server for health sciences
Titre abrégé: medRxiv
Pays: United States
ID NLM: 101767986

Informations de publication

Date de publication:
27 Oct 2020
Historique:
pubmed: 4 11 2020
medline: 4 11 2020
entrez: 3 11 2020
Statut: epublish

Résumé

Early identification of symptoms and comorbidities most predictive of COVID-19 is critical to identify infection, guide policies to effectively contain the pandemic, and improve health systems' response. Here, we characterised socio-demographics and comorbidity in 3,316,107persons tested and 219,072 persons tested positive for SARS-CoV-2 since January 2020, and their key health outcomes in the month following the first positive test. Routine care data from primary care electronic health records (EHR) from Spain, hospital EHR from the United States (US), and claims data from South Korea and the US were used. The majority of study participants were women aged 18-65 years old. Positive/tested ratio varied greatly geographically (2.2:100 to 31.2:100) and over time (from 50:100 in February-April to 6.8:100 in May-June). Fever, cough and dyspnoea were the most common symptoms at presentation. Between 4%-38% required admission and 1-10.5% died within a month from their first positive test. Observed disparity in testing practices led to variable baseline characteristics and outcomes, both nationally (US) and internationally. Our findings highlight the importance of large scale characterization of COVID-19 international cohorts to inform planning and resource allocation including testing as countries face a second wave.

Identifiants

pubmed: 33140068
doi: 10.1101/2020.10.25.20218875
pmc: PMC7605581
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NLM NIH HHS
ID : R01 LM006910
Pays : United States
Organisme : NLM NIH HHS
ID : T15 LM007442
Pays : United States

Déclaration de conflit d'intérêts

COMPETING INTEREST STATEMENT All authors have completed the ICMJE uniform disclosure form, with the following declarations made: DPA reports grants from Amgen, grants and other from UCB Biopharma, grants from Johnson and Johnson, outside the submitted work. DM is supported by a Wellcome Trust Clinical Research Development Fellowship (Grant 214588/Z/18/Z) and reports grants from Chief Scientist Office (CSO), grants from Health Data Research UK (HDR-UK), grants from National Institute of Health Research (NIHR), and Tenovus outside the submitted work. SCY reports grants from Korean Ministry of Health & Welfare, grants from Korean Ministry of Trade, Industry & Energy, during the conduct of the study. AG reports personal fees from Regeneron Pharmaceuticals, outside the submitted work; and she is a full-time employee at Regeneron Pharmaceuticals. This work was not conducted at Regeneron Pharmaceuticals. Dr. Lane reports grants from Versus Arthritis, grants from Medical Research Council, outside the submitted work. MS reports grants from US National Science Foundation, grants from US National Institutes of Health, grants from IQVIA, personal fees from Janssen Research and Development, during the conduct of the study. HA reports personal fees from Eli Lilly and Company, outside the submitted work. AS reports personal fees from Janssen Research & Development, during the conduct of the study; personal fees from Janssen Research & Development, outside the submitted work. AS is a full-time employee of Janssen and shareholder of Johnson & Johnson. FD reports personal fees from Janssen Research & Development, during the conduct of the study; personal fees from Janssen Research & Development, outside the submitted work. KK reports she is an employee of IQVIA. CR reports he is an employee of IQVIA. FN was an employee of AstraZeneca until 2019 and holds some AstraZeneca shares. SF is an employee of Janssen Research and Development, a subsidiary of Johnson and Johnson. VS reports grant funding from the National Science Foundation, Agency for Healthcare Research and Quality, and the Arizona Board of Regents outside of the submitted work. The views expressed are those of the authors and do not necessarily represent the views or policy of the Department of Veterans Affairs or the United States Government. PR reports and is employee of Janssen Research and Development and shareholder of Johnson & Johnson. No other relationships or activities that could appear to have influenced the submitted work.

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Auteurs

Asieh Golozar (A)

Regeneron Pharmaceutical, NY USA.
Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, MD USA.

Lana Yh Lai (LY)

Division of Cancer Sciences, School of Medical Sciences, University of Manchester, UK.

Anthony G Sena (AG)

Janssen R&D, Titusville NJ, USA.
Department of Medical Informatics, Erasmus University Medical Center, Rotterdam, The Netherlands.

David Vizcaya (D)

Bayer Pharmaceuticals, Sant Joan Despi, Spain.

Lisa M Schilling (LM)

Data Science to Patient Value Program, University of Colorado Anschutz Medical Campus.

Vojtech Huser (V)

National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.

Fredrik Nyberg (F)

School of Public Health and Community Medicine, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

Scott L Duvall (SL)

VINCI, VA Salt Lake City Health Care System, Salt Lake City, VA, & Division of Epidemiology, University of Utah, Salt Lake City, UT.

Daniel R Morales (DR)

Division of Population Health and Genomics, University of Dundee, UK.

Thamir M Alshammari (TM)

Medication Safety Research Chair, King Saud University, Riyadh, Saudi Arabia.

Hamed Abedtash (H)

Eli Lilly and Company, Lilly Corporate Center, Indianapolis, IN.

Waheed-Ul-Rahman Ahmed (WU)

Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, University of Oxford, Oxford, UK.
College of Medicine and Health, University of Exeter, St Luke's Campus, Heavitree Road, Exeter, EX1 2LU, UK.

Osaid Alser (O)

Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.

Heba Alghoul (H)

Faculty of Medicine, Islamic University of Gaza, Palestine.

Ying Zhang (Y)

DHC Technologies Co. Ltd, Beijing, China.

Mengchun Gong (M)

DHC Technologies Co. Ltd, Beijing, China.

Yin Guan (Y)

DHC Technologies Co. Ltd, Beijing, China.

Carlos Areia (C)

Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.

Jitendra Jonnagaddala (J)

School of Public Health and Community Medicine, UNSW Sydney, Australia.

Karishma Shah (K)

Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, University of Oxford, Oxford, UK.

Jennifer C E Lane (JCE)

Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, University of Oxford, Oxford, UK.

Albert Prats-Uribe (A)

Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, University of Oxford, Oxford, UK.

Jose D Posada (JD)

Stanford University School of Medicine, Stanford, California, USA.

Nigam H Shah (NH)

Stanford University School of Medicine, Stanford, California, USA.

Vignesh Subbian (V)

College of Engineering, The University of Arizona, Tucson, Arizona, USA.

Lin Zhang (L)

School of Population Medicine and Public Health, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia.

Maria Tereza Fernandes Abrahão (MTF)

Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia.

Peter R Rijnbeek (PR)

Department of Medical Informatics, Erasmus University Medical Center, Rotterdam, The Netherlands.

Seng Chan You (SC)

Department of Biomedical Informatics, Ajou University School of Medicine, Suwon, South Korea.

Paula Casajust (P)

Real-World Evidence, Trial Form Support, Barcelona, Spain.

Elena Roel (E)

Fundació Institut Universitari per a la recerca a l'Atenció Primària de Salut Jordi Gol i Gurina (IDIAPJGol), Barcelona, Spain.

Martina Recalde (M)

Fundació Institut Universitari per a la recerca a l'Atenció Primària de Salut Jordi Gol i Gurina (IDIAPJGol), Barcelona, Spain.
Universitat Autònoma de Barcelona, Spain.

Sergio Fernández-Bertolín (S)

Fundació Institut Universitari per a la recerca a l'Atenció Primària de Salut Jordi Gol i Gurina (IDIAPJGol), Barcelona, Spain.

Alan Andryc (A)

Janssen R&D, Titusville NJ, USA.

Jason A Thomas (JA)

Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, USA.

Adam B Wilcox (AB)

Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, USA.
UW Medicine, Seattle, WA, USA.

Stephen Fortin (S)

Observational Health Data Analytics, Janssen Research and Development, Raritan, NJ, USA.

Clair Blacketer (C)

Janssen R&D, Titusville NJ, USA.
Department of Medical Informatics, Erasmus University Medical Center, Rotterdam, The Netherlands.

Frank DeFalco (F)

Janssen R&D, Titusville NJ, USA.

Karthik Natarajan (K)

Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY 10032, USA.
New York-Presbyterian Hospital, 622 W 168 St, PH20 New York, NY 10032 USA.

Thomas Falconer (T)

Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY 10032, USA.

Matthew Spotnitz (M)

Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY 10032, USA.

Anna Ostropolets (A)

Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY 10032, USA.

George Hripcsak (G)

Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY 10032, USA.
New York-Presbyterian Hospital, 622 W 168 St, PH20 New York, NY 10032 USA.

Marc Suchard (M)

Department of Biostatistics, Fielding School of Public Health, University of California, Los Angeles, USA.

Kristine E Lynch (KE)

VINCI, VA Salt Lake City Health Care System, Salt Lake City, VA, & Division of Epidemiology, University of Utah, Salt Lake City, UT.

Michael E Matheny (ME)

VINCI, Tennessee Valley Healthcare System VA, Nashville, TN & Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN.

Andrew Williams (A)

Tufts Institute for Clinical Research and Health Policy Studies, US.

Christian Reich (C)

Real World Solutions, IQVIA, Cambridge, MA, USA.

Talita Duarte-Salles (T)

Fundació Institut Universitari per a la recerca a l'Atenció Primària de Salut Jordi Gol i Gurina (IDIAPJGol), Barcelona, Spain.

Kristin Kostka (K)

Real World Solutions, IQVIA, Cambridge, MA, USA.

Patrick B Ryan (PB)

Janssen R&D, Titusville NJ, USA.
Department of Medical Informatics, Erasmus University Medical Center, Rotterdam, The Netherlands.

Daniel Prieto-Alhambra (D)

Centre for Statistics in Medicine (CSM), Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences (NDROMS), University of Oxford, UK.

Classifications MeSH