Three-dimensional collagen fiber mapping and tractography of human uterine tissue using OCT.


Journal

Biomedical optics express
ISSN: 2156-7085
Titre abrégé: Biomed Opt Express
Pays: United States
ID NLM: 101540630

Informations de publication

Date de publication:
01 Oct 2020
Historique:
received: 27 05 2020
revised: 23 07 2020
accepted: 30 07 2020
entrez: 5 11 2020
pubmed: 6 11 2020
medline: 6 11 2020
Statut: epublish

Résumé

Automatic quantification and visualization of 3-D collagen fiber architecture using Optical Coherence Tomography (OCT) has previously relied on polarization information and/or prior knowledge of tissue-specific fiber architecture. This study explores image processing, enhancement, segmentation, and detection algorithms to map 3-D collagen fiber architecture from OCT images alone. 3-D fiber mapping, histogram analysis, and 3-D tractography revealed fiber groupings and macro-organization previously unseen in uterine tissue samples. We applied our method on centimeter-scale mosaic OCT volumes of uterine tissue blocks from pregnant and non-pregnant specimens revealing a complex, patient-specific network of fibrous collagen and myocyte bundles.

Identifiants

pubmed: 33149968
doi: 10.1364/BOE.397041
pii: 397041
pmc: PMC7587264
doi:

Types de publication

Journal Article

Langues

eng

Pagination

5518-5541

Subventions

Organisme : NHLBI NIH HHS
ID : DP2 HL127776
Pays : United States
Organisme : NICHD NIH HHS
ID : R01 HD082251
Pays : United States
Organisme : NICHD NIH HHS
ID : R01 HD091153
Pays : United States

Informations de copyright

© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Déclaration de conflit d'intérêts

The authors declare that there are no conflicts of interest related to this article.

Références

Am J Physiol Heart Circ Physiol. 2008 Sep;295(3):H1243-H1252
pubmed: 18641274
Exp Eye Res. 2015 Apr;133:81-99
pubmed: 25819457
J Biomed Opt. 2004 Jan-Feb;9(1):47-74
pubmed: 14715057
J Biomech. 2003 Oct;36(10):1529-53
pubmed: 14499302
Biomed Opt Express. 2019 Mar 22;10(4):1942-1956
pubmed: 31086712
Biophys J. 2018 Mar 27;114(6):1477-1489
pubmed: 29590604
Opt Lett. 2012 Aug 15;37(16):3312-4
pubmed: 23381241
Tissue Eng Part A. 2016 Oct;22(19-20):1204-1217
pubmed: 27600605
Med Image Anal. 2018 May;46:57-72
pubmed: 29502033
Biomech Model Mechanobiol. 2018 Apr;17(2):543-557
pubmed: 29177933
J Biomed Opt. 2013 Apr;18(4):046003
pubmed: 23552635
Biomed Opt Express. 2017 Dec 08;9(1):173-189
pubmed: 29359095
PLoS One. 2017 Mar 16;12(3):e0173404
pubmed: 28301486
PLoS One. 2016 Nov 29;11(11):e0166709
pubmed: 27898677
Biomed Opt Express. 2015 Mar 03;6(4):1090-108
pubmed: 25908997
J Biomed Opt. 2012 Jul;17(7):071309
pubmed: 22894470
Opt Lett. 2012 Sep 15;37(18):3882-4
pubmed: 23041891
Anat Rec A Discov Mol Cell Evol Biol. 2006 Jan;288(1):84-90
pubmed: 16345078
J Biomed Opt. 2008 May-Jun;13(3):030505
pubmed: 18601522
Sci Rep. 2020 Mar 27;10(1):5632
pubmed: 32221334
Appl Opt. 2015 Nov 20;54(33):9848-54
pubmed: 26836548
Opt Express. 2019 May 13;27(10):14457-14471
pubmed: 31163895
Neuroimage. 2011 Oct 15;58(4):984-92
pubmed: 21771662
Osteoarthritis Cartilage. 2009 Jan;17(1):33-42
pubmed: 18621555
Wiley Interdiscip Rev Syst Biol Med. 2017 Sep;9(5):
pubmed: 28498625
Reproduction. 2018 Jul;156(1):71-79
pubmed: 29712877
IEEE Trans Image Process. 2007 Aug;16(8):2080-95
pubmed: 17688213
Exp Biol Med (Maywood). 2020 Feb;245(4):273-281
pubmed: 31813275
Biomed Opt Express. 2013 Sep 13;4(10):2150-65
pubmed: 24156071
Biomaterials. 2017 Feb;116:34-47
pubmed: 27914265

Auteurs

James P McLean (JP)

Department of Electrical Engineering, Columbia University, New York, NY 10027, USA.

Shuyang Fang (S)

Department of Mechanical Engineering, Columbia University, New York, NY 10027, USA.

George Gallos (G)

Department of Anesthesiology, Columbia University Irving Medical Center, New York, NY 10032, USA.

Kristin M Myers (KM)

Department of Mechanical Engineering, Columbia University, New York, NY 10027, USA.

Christine P Hendon (CP)

Department of Electrical Engineering, Columbia University, New York, NY 10027, USA.

Classifications MeSH