The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR.

Bioinformatics ELIXIR Education Germany Life Sciences Training de.NBI de.NBI Cloud

Journal

F1000Research
ISSN: 2046-1402
Titre abrégé: F1000Res
Pays: England
ID NLM: 101594320

Informations de publication

Date de publication:
2019
Historique:
accepted: 22 10 2019
entrez: 9 11 2020
pubmed: 10 11 2020
medline: 2 2 2021
Statut: epublish

Résumé

The German Network for Bioinformatics Infrastructure (de.NBI) is a national and academic infrastructure funded by the German Federal Ministry of Education and Research (BMBF). The de.NBI provides (i) service, (ii) training, and (iii) cloud computing to users in life sciences research and biomedicine in Germany and Europe and (iv) fosters the cooperation of the German bioinformatics community with international network structures. The de.NBI members also run the German node (ELIXIR-DE) within the European ELIXIR network. The de.NBI / ELIXIR-DE training platform, also known as special interest group 3 (SIG 3) 'Training & Education', coordinates the bioinformatics training of de.NBI and the German ELIXIR node. The network provides a high-quality, coherent, timely, and impactful training program across its eight service centers. Life scientists learn how to handle and analyze biological big data more effectively by applying tools, standards and compute services provided by de.NBI. Since 2015, more than 250 training courses were carried out with more than 5,200 participants and these courses received recommendation rates of almost 90% (status as of October 2019). In addition to face-to-face training courses, online training was introduced on the de.NBI website in 2016 and guidelines for the preparation of e-learning material were established in 2018. In 2016, ELIXIR-DE joined the ELIXIR training platform. Here, the de.NBI / ELIXIR-DE training platform collaborates with ELIXIR in training activities, advertising training courses via TeSS and discussions on the exchange of data for training events essential for quality assessment on both the technical and administrative levels. The de.NBI training program trained thousands of scientists from Germany and beyond in many different areas of bioinformatics.

Identifiants

pubmed: 33163154
doi: 10.12688/f1000research.20244.1
pmc: PMC7607484
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Copyright: © 2019 Wibberg D et al.

Déclaration de conflit d'intérêts

No competing interests were disclosed.

Auteurs

Daniel Wibberg (D)

Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, 33501, Germany.

Bérénice Batut (B)

Bioinformatics Group, Department of Computer Science, Albert-Ludwigs-University Freiburg, Freiburg, 79110, Germany.

Peter Belmann (P)

Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, 33501, Germany.

Jochen Blom (J)

Bioinformatics and Systems Biology, Justus-Liebig-University Giessen, Giessen, 35392, Germany.

Frank Oliver Glöckner (FO)

Alfred-Wegener-Institut - Helmholtz Zentrum für Polar- und Meeresforschung and Jacobs University Bremen, Campus Ring 1, Bremen, 28759, Germany.

Björn Grüning (B)

Bioinformatics Group, Department of Computer Science, Albert-Ludwigs-University Freiburg, Freiburg, 79110, Germany.

Nils Hoffmann (N)

Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, 44227, Germany.

Nils Kleinbölting (N)

Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, 33501, Germany.

René Rahn (R)

Algorithmic Bioinformatics, Department of Mathematics and Computer Science, Freie Universität Berlin, Takustraße 9, Berlin, 14195, Germany.

Maja Rey (M)

Scientific Databases and Visualization Group, Heidelberg Institute for Theoretical Studies (HITS) gGmbH, Schloss-Wolfsbrunnenweg 35, Heidelberg, 69118, Germany.

Uwe Scholz (U)

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, 06466, Germany.

Malvika Sharan (M)

The Heidelberg Center for Human Bioinformatics (HD-HuB), European Molecular Biology Laboratory, Meyerhofstrasse 1, Heidelberg, 69117, Germany.

Andreas Tauch (A)

Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, 33501, Germany.

Ulrike Trojahn (U)

The Heidelberg Center for Human Bioinformatics (HD-HuB), European Molecular Biology Laboratory, Meyerhofstrasse 1, Heidelberg, 69117, Germany.

Björn Usadel (B)

IBG-2 Plant Sciences, Forschungszentrum Jülich, Jülich, 52428, Germany.

Oliver Kohlbacher (O)

Applied Bioinformatics, Department of Computer Science, University of Tübingen, Tübingen, 72076, Germany.
Institute for Bioinformatics and Medical Informatics, University of Tübingen, Tübingen, 72076, Germany.
Translational Bioinformatics, University Hospital Tubingen, Tübingen, 72076, Germany.
Biomolecular Interactions, Max Planck Institute for Development Biology, Tübingen, 72076, Germany.

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Classifications MeSH