CRISPR-Mediated Isogenic Cell-SELEX Approach for Generating Highly Specific Aptamers Against Native Membrane Proteins.

Affinity reagents Aptamer CRISPR Nucleic acid therapeutics SELEX

Journal

Cellular and molecular bioengineering
ISSN: 1865-5025
Titre abrégé: Cell Mol Bioeng
Pays: United States
ID NLM: 101468590

Informations de publication

Date de publication:
Oct 2020
Historique:
received: 12 02 2020
accepted: 02 09 2020
entrez: 13 11 2020
pubmed: 14 11 2020
medline: 14 11 2020
Statut: epublish

Résumé

The generation of affinity reagents that bind native membrane proteins with high specificity remains challenging. Most Using a Caco-2 epithelial cell line with constitutive Cas9 expression, we knocked out the 10 rounds of cell-SELEX were conducted Our data indicate that highly specific aptamers can be isolated with a SELEX strategy that utilizes isogenic cell lines. This approach may be broadly useful for generating affinity reagents that selectively bind to membrane proteins in their native conformations on the cell surface.

Identifiants

pubmed: 33184583
doi: 10.1007/s12195-020-00651-y
pii: 651
pmc: PMC7596163
doi:

Types de publication

Journal Article

Langues

eng

Pagination

559-574

Subventions

Organisme : NIDDK NIH HHS
ID : P30 DK058404
Pays : United States
Organisme : NCRR NIH HHS
ID : G20 RR030956
Pays : United States
Organisme : NEI NIH HHS
ID : P30 EY008126
Pays : United States
Organisme : NIGMS NIH HHS
ID : T32 GM007347
Pays : United States
Organisme : NCI NIH HHS
ID : P30 CA068485
Pays : United States

Informations de copyright

© Biomedical Engineering Society 2020.

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Auteurs

Jonah C Rosch (JC)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, PMB 351604, 2301 Vanderbilt Place, Nashville, TN 37235-1604 USA.

Emma H Neal (EH)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, PMB 351604, 2301 Vanderbilt Place, Nashville, TN 37235-1604 USA.

Daniel A Balikov (DA)

Department of Biomedical Engineering, Vanderbilt University, Nashville, TN USA.
Department of Internal Medicine, University of Michigan School of Medicine, Ann Arbor, MI USA.

Mohsin Rahim (M)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, PMB 351604, 2301 Vanderbilt Place, Nashville, TN 37235-1604 USA.

Ethan S Lippmann (ES)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, PMB 351604, 2301 Vanderbilt Place, Nashville, TN 37235-1604 USA.
Department of Biomedical Engineering, Vanderbilt University, Nashville, TN USA.
Vanderbilt Brain Institute, Vanderbilt University Medical Center, Nashville, TN USA.
Interdisciplinary Materials Science Program, Vanderbilt University, Nashville, TN USA.

Classifications MeSH