The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.
Big Data
Community of Practice
FAIR data
agriculture
agrifood systems
data annotation
data labeling
knowledge representation
ontologies
semantics for agriculture
Journal
Patterns (New York, N.Y.)
ISSN: 2666-3899
Titre abrégé: Patterns (N Y)
Pays: United States
ID NLM: 101767765
Informations de publication
Date de publication:
09 Oct 2020
09 Oct 2020
Historique:
received:
06
03
2020
revised:
28
05
2020
accepted:
24
08
2020
entrez:
18
11
2020
pubmed:
19
11
2020
medline:
19
11
2020
Statut:
epublish
Résumé
Heterogeneous and multidisciplinary data generated by research on sustainable global agriculture and agrifood systems requires quality data labeling or annotation in order to be interoperable. As recommended by the FAIR principles, data, labels, and metadata must use controlled vocabularies and ontologies that are popular in the knowledge domain and commonly used by the community. Despite the existence of robust ontologies in the Life Sciences, there is currently no comprehensive full set of ontologies recommended for data annotation across agricultural research disciplines. In this paper, we discuss the added value of the Ontologies Community of Practice (CoP) of the CGIAR Platform for Big Data in Agriculture for harnessing relevant expertise in ontology development and identifying innovative solutions that support quality data annotation. The Ontologies CoP stimulates knowledge sharing among stakeholders, such as researchers, data managers, domain experts, experts in ontology design, and platform development teams.
Identifiants
pubmed: 33205138
doi: 10.1016/j.patter.2020.100105
pii: S2666-3899(20)30139-2
pmc: PMC7660444
doi:
Types de publication
Journal Article
Langues
eng
Pagination
100105Subventions
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/L024055/1
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BBS/E/T/000PR9817
Pays : United Kingdom
Informations de copyright
© 2020.
Déclaration de conflit d'intérêts
The authors declare no competing interests.
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