RNAi technology targeting the

FGFR3-TACC3 RNAi fusion genes glioblastoma precision medicine

Journal

Neuro-oncology advances
ISSN: 2632-2498
Titre abrégé: Neurooncol Adv
Pays: England
ID NLM: 101755003

Informations de publication

Date de publication:
Historique:
entrez: 26 11 2020
pubmed: 27 11 2020
medline: 27 11 2020
Statut: epublish

Résumé

Fusion genes form as a result of abnormal chromosomal rearrangements linking previously separate genes into one transcript. The FGFR3-TACC3 fusion gene (F3-T3) has been shown to drive gliomagenesis in glioblastoma (GBM), a cancer that is notoriously resistant to therapy. However, successful targeting of F3-T3 via small molecular inhibitors has not revealed robust therapeutic responses, and specific targeting of F3-T3 has not been achieved heretofore. Here, we demonstrate that depleting F3-T3 using custom siRNA to the fusion breakpoint junction results in successful inhibition of F3-T3+ GBMs, and that exosomes can successfully deliver these siRNAs. We engineered 10 unique siRNAs (iF3T3) that specifically spanned the most common F3-T3 breakpoint with varying degrees of overlap, and assayed depletion by qPCR and immunoblotting. Cell viability assays were performed. Mesenchymal stem cell-derived exosomes (UC-MSC) were electroporated with iF3T3, added to cells, and F3-T3 depletion measured by qPCR. We verified that depleting F3-T3 using shRNA to FGFR3 resulted in decreased cell viability and improved survival in glioma-bearing mice. We then demonstrated that 7/10 iF3T3 depleted F3-T3, and importantly, did not affect levels of wild-type (WT) FGFR3 or TACC3. iF3T3 decreased cell viability in both F3T3+ GBM and bladder cancer cell lines. UC-MSC exosomes successfully delivered iF3T3 in vitro, resulting in F3-T3 depletion. Targeting F3-T3 using siRNAs specific to the fusion breakpoint is capable of eradicating F3T3+ cancers without toxicity related to inhibition of WT FGFR3 or TACC3, and UC-MSC exosomes may be a plausible vehicle to deliver iF3T3.

Sections du résumé

BACKGROUND BACKGROUND
Fusion genes form as a result of abnormal chromosomal rearrangements linking previously separate genes into one transcript. The FGFR3-TACC3 fusion gene (F3-T3) has been shown to drive gliomagenesis in glioblastoma (GBM), a cancer that is notoriously resistant to therapy. However, successful targeting of F3-T3 via small molecular inhibitors has not revealed robust therapeutic responses, and specific targeting of F3-T3 has not been achieved heretofore. Here, we demonstrate that depleting F3-T3 using custom siRNA to the fusion breakpoint junction results in successful inhibition of F3-T3+ GBMs, and that exosomes can successfully deliver these siRNAs.
METHODS METHODS
We engineered 10 unique siRNAs (iF3T3) that specifically spanned the most common F3-T3 breakpoint with varying degrees of overlap, and assayed depletion by qPCR and immunoblotting. Cell viability assays were performed. Mesenchymal stem cell-derived exosomes (UC-MSC) were electroporated with iF3T3, added to cells, and F3-T3 depletion measured by qPCR.
RESULTS RESULTS
We verified that depleting F3-T3 using shRNA to FGFR3 resulted in decreased cell viability and improved survival in glioma-bearing mice. We then demonstrated that 7/10 iF3T3 depleted F3-T3, and importantly, did not affect levels of wild-type (WT) FGFR3 or TACC3. iF3T3 decreased cell viability in both F3T3+ GBM and bladder cancer cell lines. UC-MSC exosomes successfully delivered iF3T3 in vitro, resulting in F3-T3 depletion.
CONCLUSION CONCLUSIONS
Targeting F3-T3 using siRNAs specific to the fusion breakpoint is capable of eradicating F3T3+ cancers without toxicity related to inhibition of WT FGFR3 or TACC3, and UC-MSC exosomes may be a plausible vehicle to deliver iF3T3.

Identifiants

pubmed: 33241214
doi: 10.1093/noajnl/vdaa132
pii: vdaa132
pmc: PMC7680176
doi:

Types de publication

Journal Article

Langues

eng

Pagination

vdaa132

Informations de copyright

© The Author(s) 2020. Published by Oxford University Press, the Society for Neuro-Oncology and the European Association of Neuro-Oncology.

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Auteurs

Brittany C Parker Kerrigan (BC)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Daniel Ledbetter (D)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Matthew Kronowitz (M)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Lynette Phillips (L)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Joy Gumin (J)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Anwar Hossain (A)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Jing Yang (J)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Mayela Mendt (M)

Department of Stem Cell Transplantation, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Sanjay Singh (S)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

David Cogdell (D)

Department of Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Chibawanye Ene (C)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Brain Tumor Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Elizabeth Shpall (E)

Department of Stem Cell Transplantation, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Frederick F Lang (FF)

Department of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Classifications MeSH