LexExp: a system for automatically expanding concept lexicons for noisy biomedical texts.
Journal
Bioinformatics (Oxford, England)
ISSN: 1367-4811
Titre abrégé: Bioinformatics
Pays: England
ID NLM: 9808944
Informations de publication
Date de publication:
25 08 2021
25 08 2021
Historique:
received:
31
05
2020
revised:
04
10
2020
accepted:
17
11
2020
pubmed:
28
11
2020
medline:
21
9
2021
entrez:
27
11
2020
Statut:
ppublish
Résumé
LexExp is an open-source, data-centric lexicon expansion system that generates spelling variants of lexical expressions in a lexicon using a phrase embedding model, lexical similarity-based natural language processing methods and a set of tunable threshold decay functions. The system is customizable, can be optimized for recall or precision and can generate variants for multi-word expressions. Code available at: https://bitbucket.org/asarker/lexexp; data and resources available at: https://sarkerlab.org/lexexp. Supplementary data are available at Bioinformatics online.
Identifiants
pubmed: 33244602
pii: 6007257
doi: 10.1093/bioinformatics/btaa995
pmc: PMC8388038
doi:
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
2499-2501Subventions
Organisme : NIDA NIH HHS
ID : R01 DA046619
Pays : United States
Informations de copyright
© The Author(s) 2020. Published by Oxford University Press.
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