A Parsimonious Granger Causality Formulation for Capturing Arbitrarily Long Multivariate Associations.

Granger causality MEG connectivity directed brain connectivity laguerre polynomials

Journal

Entropy (Basel, Switzerland)
ISSN: 1099-4300
Titre abrégé: Entropy (Basel)
Pays: Switzerland
ID NLM: 101243874

Informations de publication

Date de publication:
26 Jun 2019
Historique:
received: 03 05 2019
revised: 23 06 2019
accepted: 24 06 2019
entrez: 3 12 2020
pubmed: 26 6 2019
medline: 26 6 2019
Statut: epublish

Résumé

High-frequency neuroelectric signals like electroencephalography (EEG) or magnetoencephalography (MEG) provide a unique opportunity to infer causal relationships between local activity of brain areas. While causal inference is commonly performed through classical Granger causality (GC) based on multivariate autoregressive models, this method may encounter important limitations (e.g., data paucity) in the case of high dimensional data from densely connected systems like the brain. Additionally, physiological signals often present long-range dependencies which commonly require high autoregressive model orders/number of parameters. We present a generalization of autoregressive models for GC estimation based on Wiener-Volterra decompositions with Laguerre polynomials as basis functions. In this basis, the introduction of only one additional global parameter allows to capture arbitrary long dependencies without increasing model order, hence retaining model simplicity, linearity and ease of parameters estimation. We validate our method in synthetic data generated from families of complex, densely connected networks and demonstrate superior performance as compared to classical GC. Additionally, we apply our framework to studying the directed human brain connectome through MEG data from 89 subjects drawn from the Human Connectome Project (HCP) database, showing that it is able to reproduce current knowledge as well as to uncover previously unknown directed influences between cortical and limbic brain regions.

Identifiants

pubmed: 33267342
pii: e21070629
doi: 10.3390/e21070629
pmc: PMC7515122
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Medical Research Council
ID : MR/P01271X/1
Pays : United Kingdom

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Auteurs

Andrea Duggento (A)

Department of Biomedicine and Prevention, University of Rome Tor Vergata, 00133 Rome, Italy.

Gaetano Valenza (G)

Department of Information Engineering and Research Centre "E. Piaggio", University of Pisa, 56122 Pisa, Italy.

Luca Passamonti (L)

Institute of Bioimaging and Molecular Physiology, National Research Council, 20090 Milano, Italy.
Department of Clinical Neurosciences, University of Cambridge, Cambridge CB2 0QQ, UK.

Salvatore Nigro (S)

Department of Experimental and Clinical Medicine, Magna Graecia University, 88100 Catanzaro, Italy.

Maria Giovanna Bianco (MG)

Department of Health Sciences, Magna Graecia University, 88100 Catanzaro, Italy.

Maria Guerrisi (M)

Department of Biomedicine and Prevention, University of Rome Tor Vergata, 00133 Rome, Italy.

Riccardo Barbieri (R)

Department of Electronics, Informatics and Bioengineering, Politecnico di Milano, 20133 Milano, Italy.

Nicola Toschi (N)

Department of Biomedicine and Prevention, University of Rome Tor Vergata, 00133 Rome, Italy.
Department of Radiology, Martinos Center for Biomedical Imaging and Harvard Medical School, Boston, MA 02129, USA.

Classifications MeSH