Identification of a Novel Cobamide Remodeling Enzyme in the Beneficial Human Gut Bacterium Akkermansia muciniphila.


Journal

mBio
ISSN: 2150-7511
Titre abrégé: mBio
Pays: United States
ID NLM: 101519231

Informations de publication

Date de publication:
08 12 2020
Historique:
entrez: 9 12 2020
pubmed: 10 12 2020
medline: 8 9 2021
Statut: epublish

Résumé

The beneficial human gut bacterium

Identifiants

pubmed: 33293380
pii: mBio.02507-20
doi: 10.1128/mBio.02507-20
pmc: PMC7733943
pii:
doi:

Substances chimiques

Bacterial Proteins 0
Cobamides 0
Vitamin B 12 P6YC3EG204

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIGMS NIH HHS
ID : R01 GM114535
Pays : United States

Informations de copyright

Copyright © 2020 Mok et al.

Références

Bioinformatics. 2012 Dec 1;28(23):3150-2
pubmed: 23060610
Front Microbiol. 2011 Aug 01;2:166
pubmed: 21904534
Environ Microbiol. 2015 Dec;17(12):4873-84
pubmed: 24803319
Nat Med. 2017 Jan;23(1):107-113
pubmed: 27892954
Biotechnol Lett. 2013 Sep;35(9):1481-6
pubmed: 23660703
Microbiology (Reading). 2014 Jun;160(Pt 6):1087-1100
pubmed: 24694374
Gut. 2018 May;67(5):891-901
pubmed: 28550049
Nat Microbiol. 2016 Jan 27;1:15021
pubmed: 27571978
Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5
pubmed: 27095192
Gastroenterol Clin North Am. 2017 Mar;46(1):77-89
pubmed: 28164854
Biochem Biophys Res Commun. 2018 Mar 25;498(1):111-118
pubmed: 29496453
Front Microbiol. 2017 Sep 26;8:1804
pubmed: 29033903
J Mol Biol. 2007 Nov 23;374(2):443-53
pubmed: 17936787
Crit Rev Food Sci Nutr. 2019;59(19):3227-3236
pubmed: 30373382
J Bacteriol. 2018 Mar 26;200(8):
pubmed: 29378885
Structure. 2000 Aug 15;8(8):817-30
pubmed: 10997901
Elife. 2018 May 29;7:
pubmed: 29809140
J Bacteriol. 2007 Jul;189(13):4555-60
pubmed: 17483216
Appl Microbiol Biotechnol. 2014 Jan;98(2):717-25
pubmed: 23644747
J Biol Chem. 1994 Jan 28;269(4):2687-94
pubmed: 8300598
Antonie Van Leeuwenhoek. 2018 Jun;111(6):859-873
pubmed: 29460206
PLoS Pathog. 2019 Jan 3;15(1):e1007479
pubmed: 30605490
Cell. 2012 Mar 16;148(6):1258-70
pubmed: 22424233
Curr Opin Microbiol. 2013 Jun;16(3):255-61
pubmed: 23831042
Appl Environ Microbiol. 2012 Nov;78(21):7745-52
pubmed: 22923412
Int J Mol Sci. 2018 Dec 24;20(1):
pubmed: 30586940
Biochemistry. 1994 Feb 15;33(6):1488-94
pubmed: 7906142
Mol Microbiol. 2010 Sep;77(6):1429-38
pubmed: 20633228
J Bacteriol. 2008 Dec;190(24):8137-44
pubmed: 18849419
ISME J. 2016 May;10(5):1092-101
pubmed: 26555247
Acta Crystallogr D Biol Crystallogr. 2013 Dec;69(Pt 12):2330-9
pubmed: 24311575
Mol Syst Biol. 2006;2:2006.0008
pubmed: 16738554
Acta Crystallogr F Struct Biol Commun. 2018 Oct 1;74(Pt 10):669-676
pubmed: 30279320
Mar Biotechnol (NY). 2012 Feb;14(1):10-20
pubmed: 21519808
PLoS One. 2017 Mar 1;12(3):e0173004
pubmed: 28249045
J Gen Microbiol. 1976 Jul;95(1):173-6
pubmed: 784902
J Agric Food Chem. 2016 May 4;64(17):3386-93
pubmed: 27082657
Proc Natl Acad Sci U S A. 2006 Mar 21;103(12):4634-9
pubmed: 16537439
J Bacteriol. 1995 Nov;177(22):6371-80
pubmed: 7592411
Science. 2017 Jan 20;355(6322):294-298
pubmed: 28104891
J Mol Biol. 2006 Sep 1;361(5):920-31
pubmed: 16876192
Proc Natl Acad Sci U S A. 2008 Oct 28;105(43):16731-6
pubmed: 18936492
J Agric Food Chem. 2013 Nov 27;61(47):11468-76
pubmed: 24199681
Gut. 2014 May;63(5):727-35
pubmed: 23804561
Appl Environ Microbiol. 2020 Jan 21;86(3):
pubmed: 31757822
Nature. 2016 Jul 06;535(7610):75-84
pubmed: 27383982
Appl Environ Microbiol. 2015 Jun;81(11):3655-62
pubmed: 25795669
Eur J Biochem. 1988 Mar 1;172(2):459-64
pubmed: 3350008
Biochemistry. 1994 May 10;33(18):5469-80
pubmed: 8180169
J Bacteriol. 2013 May;195(9):1902-11
pubmed: 23417488
Appl Environ Microbiol. 2006 Feb;72(2):981-5
pubmed: 16461638
Appl Microbiol. 1974 Aug;28(2):251-7
pubmed: 4853401
Mol Microbiol. 2009 Dec;74(5):1198-210
pubmed: 19889098
Appl Environ Microbiol. 2017 May 1;83(10):
pubmed: 28283521
Arch Anim Nutr. 2009;63(5):379-88
pubmed: 26967796
Acta Crystallogr D Biol Crystallogr. 2011 Mar;67(Pt 3):149-55
pubmed: 21358045
Biol Chem Hoppe Seyler. 1990 Jun;371(6):527-36
pubmed: 2390219
Elife. 2018 Sep 18;7:
pubmed: 30226189
Protein Cell. 2012 Feb;3(2):123-31
pubmed: 22426981
Appl Environ Microbiol. 2017 Aug 31;83(18):
pubmed: 28687644
Biochemistry. 1992 Jun 23;31(24):5449-58
pubmed: 1610791
mBio. 2017 Sep 19;8(5):
pubmed: 28928206
PLoS One. 2016 Jul 28;11(7):e0160044
pubmed: 27467527
Proteins. 2002 Aug 1;48(2):423-6
pubmed: 12112707
J Bacteriol. 2011 May;193(10):2575-86
pubmed: 21441515
Cell Metab. 2014 Nov 4;20(5):769-778
pubmed: 25440056
Curr Biol. 2016 Apr 25;26(8):999-1008
pubmed: 27040778
FEBS Lett. 2010 Jul 16;584(14):3223-6
pubmed: 20558164
Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6640-5
pubmed: 10829079
ISME J. 2019 Mar;13(3):789-804
pubmed: 30429574
PLoS Biol. 2014 Jun 24;12(6):e1001889
pubmed: 24959919
J Bacteriol. 2020 Jan 2;202(2):
pubmed: 31685533
Nat Microbiol. 2018 Apr;3(4):514-522
pubmed: 29556107
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Sep 1;66(Pt 9):1003-12
pubmed: 20823514
J Mol Biol. 1990 Mar 5;212(1):211-35
pubmed: 2319597
Clin Transl Immunology. 2016 Apr 22;5(4):e73
pubmed: 27195116
Proc Natl Acad Sci U S A. 1990 Jan;87(2):618-22
pubmed: 2405386
Front Microbiol. 2018 Aug 14;9:1835
pubmed: 30154767
Microb Biotechnol. 2019 Mar;12(2):346-359
pubmed: 30549216
Proc Natl Acad Sci U S A. 2011 May 3;108(18):7368-72
pubmed: 21502530
Proc Natl Acad Sci U S A. 2004 Nov 9;101(45):15870-5
pubmed: 15514022
Structure. 1996 Mar 15;4(3):339-50
pubmed: 8805541
Biotechnol Lett. 2011 Mar;33(3):593-8
pubmed: 21072563
Proc Natl Acad Sci U S A. 2004 Mar 16;101(11):3729-36
pubmed: 14752199
Biochem J. 1992 Apr 1;283 ( Pt 1):223-33
pubmed: 1567370
Proc Natl Acad Sci U S A. 2015 Aug 25;112(34):10792-7
pubmed: 26246619
J Bacteriol. 2003 Sep;185(18):5380-90
pubmed: 12949090
Structure. 1999 Aug 15;7(8):997-1008
pubmed: 10467140
J Biol Chem. 2010 Apr 30;285(18):13942-50
pubmed: 20106986
Science. 2012 Jun 8;336(6086):1268-73
pubmed: 22674334
Proteins. 1991;9(3):153-73
pubmed: 2006134
Mutat Res. 2010 Dec;705(3):217-27
pubmed: 20667510
Environ Microbiol. 2017 Jan;19(1):29-41
pubmed: 27928878
Biotechnol Lett. 2010 Feb;32(2):261-8
pubmed: 19859667
Structure. 1999 Aug 15;7(8):891-902
pubmed: 10467146
J Dairy Sci. 2009 Sep;92(9):4524-9
pubmed: 19700714
Protein Eng Des Sel. 2014 Feb;27(2):59-64
pubmed: 24402330
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
Nature. 2020 Apr;580(7803):409-412
pubmed: 32296172
mBio. 2019 Sep 24;10(5):
pubmed: 31551329
Microb Pathog. 2017 May;106:171-181
pubmed: 26875998
Physiol Rev. 2019 Oct 1;99(4):1877-2013
pubmed: 31460832
J Agric Food Chem. 2011 Jul 27;59(14):7785-92
pubmed: 21663329
Annu Rev Microbiol. 1996;50:137-81
pubmed: 8905078
Science. 2020 Jul 3;369(6499):
pubmed: 32631870
Bioinformatics. 2009 Aug 1;25(15):1972-3
pubmed: 19505945
Cell Host Microbe. 2014 Jan 15;15(1):47-57
pubmed: 24439897
J Exp Med. 2019 Jan 7;216(1):20-40
pubmed: 30322864
Front Microbiol. 2016 Jun 15;7:925
pubmed: 27379055
Brief Bioinform. 2019 Jul 19;20(4):1160-1166
pubmed: 28968734
Proc Natl Acad Sci U S A. 2006 Sep 26;103(39):14331-6
pubmed: 16983091
Circulation. 2016 Jun 14;133(24):2434-46
pubmed: 27143680
PLoS One. 2013 Apr 30;8(4):e62987
pubmed: 23646168
Annu Rev Biochem. 2003;72:209-47
pubmed: 14527323
Proc Natl Acad Sci U S A. 2006 Dec 12;103(50):18917-22
pubmed: 17142327
BMC Genomics. 2017 Oct 18;18(1):800
pubmed: 29047329
Cell. 1999 Aug 6;98(3):397-408
pubmed: 10458614
Eur J Biochem. 2002 Sep;269(18):4484-94
pubmed: 12230560
J Biol Chem. 1991 Dec 5;266(34):22893-8
pubmed: 1720775
Cell. 2016 Jun 2;165(6):1332-1345
pubmed: 27259147
J Sci Food Agric. 2016 Jan 15;96(1):49-56
pubmed: 25809188
Nat Metab. 2019 Jan;1(1):34-46
pubmed: 32694818
Am J Clin Nutr. 2008 May;87(5):1324-35
pubmed: 18469256
Mol Microbiol. 2020 Jan;113(1):89-102
pubmed: 31609521
Appl Environ Microbiol. 2006 Feb;72(2):1310-5
pubmed: 16461681
Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1469-1476
pubmed: 15388697
J Biol Chem. 2010 Aug 20;285(34):26484-93
pubmed: 20519496
Open Biol. 2013 Feb 13;3(2):120175
pubmed: 23407640
Nat Chem Biol. 2018 Jan;14(1):8-14
pubmed: 29106396
Cell. 2014 Aug 28;158(5):1011-1021
pubmed: 25131990
Nat Methods. 2009 May;6(5):343-5
pubmed: 19363495
Nat Microbiol. 2019 Jan;4(1):35-45
pubmed: 30546094
Proc Natl Acad Sci U S A. 2013 May 28;110(22):9066-71
pubmed: 23671105
Nat Struct Mol Biol. 2008 May;15(5):515-22
pubmed: 18408731
Biochemistry. 2014 Dec 16;53(49):7805-15
pubmed: 25412146
Mol Microbiol. 2008 Nov;70(4):824-36
pubmed: 18808385

Auteurs

Kenny C Mok (KC)

Department of Plant & Microbial Biology, University of California, Berkeley, Berkeley, California, USA.

Olga M Sokolovskaya (OM)

Department of Plant & Microbial Biology, University of California, Berkeley, Berkeley, California, USA.

Alexa M Nicolas (AM)

Department of Plant & Microbial Biology, University of California, Berkeley, Berkeley, California, USA.

Zachary F Hallberg (ZF)

Department of Plant & Microbial Biology, University of California, Berkeley, Berkeley, California, USA.

Adam Deutschbauer (A)

Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Hans K Carlson (HK)

Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Michiko E Taga (ME)

Department of Plant & Microbial Biology, University of California, Berkeley, Berkeley, California, USA taga@berkeley.edu.

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