Data-Driven Uncertainty Quantification for Cardiac Electrophysiological Models: Impact of Physiological Variability on Action Potential and Spiral Wave Dynamics.

correlation electrophysiology sensitivity analysis uncertainty quantification variability

Journal

Frontiers in physiology
ISSN: 1664-042X
Titre abrégé: Front Physiol
Pays: Switzerland
ID NLM: 101549006

Informations de publication

Date de publication:
2020
Historique:
received: 20 07 2020
accepted: 20 10 2020
entrez: 17 12 2020
pubmed: 18 12 2020
medline: 18 12 2020
Statut: epublish

Résumé

Computational modeling of cardiac electrophysiology (EP) has recently transitioned from a scientific research tool to clinical applications. To ensure reliability of clinical or regulatory decisions made using cardiac EP models, it is vital to evaluate the uncertainty in model predictions. Model predictions are uncertain because there is typically substantial uncertainty in model input parameters, due to measurement error or natural variability. While there has been much recent uncertainty quantification (UQ) research for cardiac EP models, all previous work has been limited by either: (i) considering uncertainty in only a subset of the full set of parameters; and/or (ii) assigning arbitrary variation to parameters (e.g., ±10 or 50% around mean value) rather than basing the parameter uncertainty on experimental data. In our recent work we overcame the first limitation by performing UQ and sensitivity analysis using a novel canine action potential model, allowing all parameters to be uncertain, but with arbitrary variation. Here, we address the second limitation by extending our previous work to use data-driven estimates of parameter uncertainty. Overall, we estimated uncertainty due to population variability in all parameters in five currents active during repolarization: inward potassium rectifier, transient outward potassium, L-type calcium, rapidly and slowly activating delayed potassium rectifier; 25 parameters in total (all model parameters except fast sodium current parameters). A variety of methods was used to estimate the variability in these parameters. We then propagated the uncertainties through the model to determine their impact on predictions of action potential shape, action potential duration (APD) prolongation due to drug block, and spiral wave dynamics. Parameter uncertainty had a significant effect on model predictions, especially L-type calcium current parameters. Correlation between physiological parameters was determined to play a role in physiological realism of action potentials. Surprisingly, even model outputs that were relative differences, specifically drug-induced APD prolongation, were heavily impacted by the underlying uncertainty. This is the first data-driven end-to-end UQ analysis in cardiac EP accounting for uncertainty in the vast majority of parameters, including first in tissue, and demonstrates how future UQ could be used to ensure model-based decisions are robust to all underlying parameter uncertainties.

Identifiants

pubmed: 33329034
doi: 10.3389/fphys.2020.585400
pmc: PMC7711195
doi:

Types de publication

Journal Article

Langues

eng

Pagination

585400

Subventions

Organisme : NHLBI NIH HHS
ID : R01 HL143450
Pays : United States

Informations de copyright

Copyright © 2020 Pathmanathan, Galappaththige, Cordeiro, Kaboudian, Fenton and Gray.

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Auteurs

Pras Pathmanathan (P)

U.S. Food and Drug Administration, Center for Devices and Radiological Health, Silver Spring, MD, United States.

Suran K Galappaththige (SK)

U.S. Food and Drug Administration, Center for Devices and Radiological Health, Silver Spring, MD, United States.

Jonathan M Cordeiro (JM)

Department of Experimental Cardiology, Masonic Medical Research Institute, Utica, NY, United States.

Abouzar Kaboudian (A)

School of Physics, Georgia Institute of Technology, Atlanta, GA, United States.

Flavio H Fenton (FH)

School of Physics, Georgia Institute of Technology, Atlanta, GA, United States.

Richard A Gray (RA)

U.S. Food and Drug Administration, Center for Devices and Radiological Health, Silver Spring, MD, United States.

Classifications MeSH