Frontiers in Multiscale Modeling of Photoreceptor Proteins.

Bacterial Proteins / chemistry Green Fluorescent Proteins / chemistry Models, Molecular Photoreceptors, Microbial / chemistry Phytochrome / chemistry Poisson Distribution Quantum Theory Rhodopsin / chemistry Static Electricity

Journal

Photochemistry and photobiology
ISSN: 1751-1097
Titre abrégé: Photochem Photobiol
Pays: United States
ID NLM: 0376425

Informations de publication

Date de publication:
03 2021
Historique:
received: 12 10 2020
accepted: 01 11 2020
pubmed: 29 12 2020
medline: 7 10 2021
entrez: 28 12 2020
Statut: ppublish

Résumé

This perspective article highlights the challenges in the theoretical description of photoreceptor proteins using multiscale modeling, as discussed at the CECAM workshop in Tel Aviv, Israel. The participants have identified grand challenges and discussed the development of new tools to address them. Recent progress in understanding representative proteins such as green fluorescent protein, photoactive yellow protein, phytochrome, and rhodopsin is presented, along with methodological developments.

Identifiants

DOI: 10.1111/php.13372 PMID: 33369749 PMC: PMC9185909
pubmed: 33369749
doi: 10.1111/php.13372
pmc: PMC9185909
mid: NIHMS1810309
doi:

Substances chimiques

Bacterial Proteins 0
Photoreceptors, Microbial 0
photoactive yellow protein, Bacteria 0
Phytochrome 11121-56-5
Green Fluorescent Proteins 147336-22-9
Rhodopsin 9009-81-8

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

243-269

Subventions

Organisme : NIGMS NIH HHS
ID : R15 GM126627
Pays : United States
Organisme : NIH HHS
ID : 1R15GM126627
Pays : United States
Organisme : Swiss National Science Foundation
ID : 200020-172532
Pays : Switzerland

Informations de copyright

© 2021 American Society for Photobiology.

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Auteurs

Maria-Andrea Mroginski (MA)

Institut für Chemie, Technische Universität Berlin, Berlin, Germany.
ORCID: 0000-0002-7497-5631

Suliman Adam (S)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0002-0891-5008

Gil S Amoyal (GS)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0002-2505-4692

Avishai Barnoy (A)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0001-9598-7044

Ana-Nicoleta Bondar (AN)

Freie Universität Berlin, Department of Physics, Theoretical Molecular Biophysics Group, Berlin, Germany.

Veniamin A Borin (VA)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0001-7832-1443

Jonathan R Church (JR)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0001-5986-1305

Tatiana Domratcheva (T)

Department of Chemistry, Lomonosov Moscow State University, Moscow, Russia.
Department Biomolecular Mechanisms, Max Planck Institute for Medical Research, Heidelberg, Germany.
ORCID: 0000-0002-7001-1114

Bernd Ensing (B)

Van 't Hoff Institute for Molecular Science and Amsterdam Center for Multiscale Modeling, University of Amsterdam, Amsterdam, The Netherlands.
ORCID: 0000-0002-4913-3571

Francesca Fanelli (F)

Department of Life Sciences, Center for Neuroscience and Neurotechnology, Università degli Studi di Modena e Reggio Emilia, Modena, Italy.

Nicolas Ferré (N)

Aix-Marseille Univ, CNRS, ICR, Marseille, France.
ORCID: 0000-0002-5583-8834

Ofer Filiba (O)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0003-4999-5443

Laura Pedraza-González (L)

Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Siena, Italy.
ORCID: 0000-0002-9806-236X

Ronald González (R)

Institut für Chemie, Technische Universität Berlin, Berlin, Germany.
ORCID: 0000-0003-2520-1215

Cristina E González-Espinoza (CE)

Département de Chimie Physique, Université de Genève, Genève, Switzerland.

Rajiv K Kar (RK)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0003-4629-5863

Lukas Kemmler (L)

Freie Universität Berlin, Department of Physics, Theoretical Molecular Biophysics Group, Berlin, Germany.

Seung Soo Kim (SS)

Department of Chemistry, Korea Advanced Institute of Science and Technology, Daejeon, Korea.
ORCID: 0000-0002-1179-9765

Jacob Kongsted (J)

Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Odense, Denmark.
ORCID: 0000-0002-7725-2164

Anna I Krylov (AI)

Department of Chemistry, University of Southern California, Los Angeles, CA, USA.
ORCID: 0000-0001-6788-5016

Yigal Lahav (Y)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
MIGAL - Galilee Research Institute, S. Industrial Zone, Kiryat Shmona, Israel.
ORCID: 0000-0002-4011-8244

Michalis Lazaratos (M)

Freie Universität Berlin, Department of Physics, Theoretical Molecular Biophysics Group, Berlin, Germany.
ORCID: 0000-0001-7587-6769

Qays NasserEddin (Q)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0002-4385-9355

Isabelle Navizet (I)

MSME, Univ Gustave Eiffel, CNRS UMR 8208, Univ Paris Est Creteil, Marne-la-Vallée, France.
ORCID: 0000-0002-2158-6157

Alexander Nemukhin (A)

Department of Chemistry, Lomonosov Moscow State University, Moscow, Russia.
Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow, Russia.
ORCID: 0000-0002-4992-6029

Massimo Olivucci (M)

Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Siena, Italy.
Chemistry Department, Bowling Green State University, Bowling Green, OH, USA.
ORCID: 0000-0002-8247-209X

Jógvan Magnus Haugaard Olsen (JMH)

Department of Chemistry, Aarhus University, Aarhus, Denmark.
Department of Chemistry, Hylleraas Centre for Quantum Molecular Sciences, UiT The Arctic University of Norway, Tromsø, Norway.
ORCID: 0000-0001-7487-944X

Alberto Pérez de Alba Ortíz (A)

Van 't Hoff Institute for Molecular Science and Amsterdam Center for Multiscale Modeling, University of Amsterdam, Amsterdam, The Netherlands.
ORCID: 0000-0003-4776-5521

Elisa Pieri (E)

Aix-Marseille Univ, CNRS, ICR, Marseille, France.
ORCID: 0000-0002-5377-5382

Aditya G Rao (AG)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0001-6771-9157

Young Min Rhee (YM)

Department of Chemistry, Korea Advanced Institute of Science and Technology, Daejeon, Korea.
ORCID: 0000-0002-2392-3962

Niccolò Ricardi (N)

Département de Chimie Physique, Université de Genève, Genève, Switzerland.

Saumik Sen (S)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0002-7490-0517

Ilia A Solov'yov (IA)

Department of Physics, Carl von Ossietzky University Oldenburg, Oldenburg, Germany.
ORCID: 0000-0002-8626-145X

Luca De Vico (L)

Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Siena, Italy.
ORCID: 0000-0002-2821-5711

Tomasz A Wesolowski (TA)

Département de Chimie Physique, Université de Genève, Genève, Switzerland.
ORCID: 0000-0001-5792-4616

Christian Wiebeler (C)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0003-1286-0860

Xuchun Yang (X)

Chemistry Department, Bowling Green State University, Bowling Green, OH, USA.

Igor Schapiro (I)

Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.
ORCID: 0000-0001-8536-6869

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Classifications MeSH

questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines bactériennes › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines luminescentes › Protéines à fluorescence verte › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Techniques d'investigation › Modèles théoriques › Modèles moléculaires › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Photorécepteurs microbiens › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Facteurs biologiques › Pigments biologiques › Phytochrome › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Statistiques comme sujet › Lois statistiques › Loi de Poisson › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Disciplines des sciences naturelles › Physique › Physique nucléaire › Théorie quantique › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Facteurs biologiques › Pigments biologiques › Pigments rétiniens › Opsines › Opsines des bâtonnets › Rhodopsine › Frontiers in Multiscale Modeling of...
questionsmedicales.fr › Phénomènes physiques › Phénomènes magnétiques › Phénomènes électromagnétiques › Électricité › Électricité statique › Frontiers in Multiscale Modeling of...