A novel circulating tamiami mammarenavirus shows potential for zoonotic spillover.
Amino Acid Sequence
/ genetics
Animals
Antigens, CD
/ metabolism
Arenaviridae
/ genetics
Arenaviridae Infections
/ transmission
Arenaviruses, New World
Cell Line
Chlorocebus aethiops
HEK293 Cells
Humans
Insect Vectors
/ virology
Receptors, Transferrin
/ metabolism
Receptors, Virus
/ metabolism
Sequence Alignment
Ticks
/ virology
Vero Cells
Viral Envelope
/ metabolism
Viral Envelope Proteins
/ genetics
Zoonoses
/ transmission
Journal
PLoS neglected tropical diseases
ISSN: 1935-2735
Titre abrégé: PLoS Negl Trop Dis
Pays: United States
ID NLM: 101291488
Informations de publication
Date de publication:
12 2020
12 2020
Historique:
received:
09
07
2020
accepted:
23
11
2020
revised:
08
01
2021
pubmed:
29
12
2020
medline:
17
2
2021
entrez:
28
12
2020
Statut:
epublish
Résumé
A detailed understanding of the mechanisms underlying the capacity of a virus to break the species barrier is crucial for pathogen surveillance and control. New World (NW) mammarenaviruses constitute a diverse group of rodent-borne pathogens that includes several causative agents of severe viral hemorrhagic fever in humans. The ability of the NW mammarenaviral attachment glycoprotein (GP) to utilize human transferrin receptor 1 (hTfR1) as a primary entry receptor plays a key role in dictating zoonotic potential. The recent isolation of Tacaribe and lymphocytic choriominingitis mammarenaviruses from host-seeking ticks provided evidence for the presence of mammarenaviruses in arthropods, which are established vectors for numerous other viral pathogens. Here, using next generation sequencing to search for other mammarenaviruses in ticks, we identified a novel replication-competent strain of the NW mammarenavirus Tamiami (TAMV-FL), which we found capable of utilizing hTfR1 to enter mammalian cells. During isolation through serial passaging in mammalian immunocompetent cells, the quasispecies of TAMV-FL acquired and enriched mutations leading to the amino acid changes N151K and D156N, within GP. Cell entry studies revealed that both substitutions, N151K and D156N, increased dependence of the virus on hTfR1 and binding to heparan sulfate proteoglycans. Moreover, we show that the substituted residues likely map to the sterically constrained trimeric axis of GP, and facilitate viral fusion at a lower pH, resulting in viral egress from later endosomal compartments. In summary, we identify and characterize a naturally occurring TAMV strain (TAMV-FL) within ticks that is able to utilize hTfR1. The TAMV-FL significantly diverged from previous TAMV isolates, demonstrating that TAMV quasispecies exhibit striking genetic plasticity that may facilitate zoonotic spillover and rapid adaptation to new hosts.
Identifiants
pubmed: 33370288
doi: 10.1371/journal.pntd.0009004
pii: PNTD-D-20-01141
pmc: PMC7794035
doi:
Substances chimiques
Antigens, CD
0
CD71 antigen
0
Receptors, Transferrin
0
Receptors, Virus
0
Viral Envelope Proteins
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0009004Subventions
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/S007555/1
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 203141/Z/16/Z
Pays : United Kingdom
Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist. Author Prof. Stefan Kunz was unable to confirm their authorship contributions. On their behalf, the corresponding author has reported their contributions to the best of their knowledge.
Références
J Virol. 2014 Aug;88(16):9418-28
pubmed: 24920811
Proc Natl Acad Sci U S A. 2008 Feb 19;105(7):2664-9
pubmed: 18268337
Nucleic Acids Res. 1988 Nov 25;16(22):10881-90
pubmed: 2849754
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2256-68
pubmed: 15572779
PLoS One. 2011;6(10):e25858
pubmed: 21998709
Lancet. 2020 Feb 22;395(10224):565-574
pubmed: 32007145
Int J Biochem Cell Biol. 2000 Mar;32(3):269-88
pubmed: 10716625
MMWR Morb Mortal Wkly Rep. 2000 Aug 11;49(31):709-11
pubmed: 10958585
J Virol. 2012 Dec;86(24):13767-71
pubmed: 23015725
J Virol. 2016 Oct 28;90(22):10329-10338
pubmed: 27605678
Nat Struct Mol Biol. 2010 Apr;17(4):438-44
pubmed: 20208545
Nature. 2018 Nov;563(7732):559-563
pubmed: 30464266
Nature. 2011 Aug 24;477(7364):340-3
pubmed: 21866103
Annu Rev Biochem. 1999;68:729-77
pubmed: 10872465
J Virol. 2020 Sep 15;94(19):
pubmed: 32669332
Proc Natl Acad Sci U S A. 2011 May 17;108(20):8426-31
pubmed: 21536871
Emerg Infect Dis. 2006 Jul;12(7):1074-80
pubmed: 16836823
Curr Top Microbiol Immunol. 2002;262:25-63
pubmed: 11987807
J Virol. 2019 Sep 12;93(19):
pubmed: 31270228
Viruses. 2012 Oct 17;4(10):2162-81
pubmed: 23202458
Science. 2014 Jan 3;343(6166):84-87
pubmed: 24336571
PLoS One. 2014 Dec 23;9(12):e115769
pubmed: 25536075
Adv Exp Med Biol. 1992;313:341-53
pubmed: 1332443
J Virol. 2006 Aug;80(15):7775-80
pubmed: 16840359
mBio. 2015 Mar 10;6(2):e02427
pubmed: 25759505
J Gen Virol. 1989 May;70 ( Pt 5):1125-32
pubmed: 2471803
Front Cell Infect Microbiol. 2017 Feb 06;7:20
pubmed: 28220142
Front Immunol. 2013 Nov 20;4:385
pubmed: 24312095
Clin Infect Dis. 2010 Dec 15;51(12):1435-41
pubmed: 21058912
Curr Top Microbiol Immunol. 2006;299:315-35
pubmed: 16568904
Nature. 2007 Mar 1;446(7131):92-6
pubmed: 17287727
Proc Natl Acad Sci U S A. 1978 Jul;75(7):3327-31
pubmed: 28524
Am J Trop Med Hyg. 1963 Jul;12:640-6
pubmed: 22324073
Viruses. 2012 Jan;4(1):83-101
pubmed: 22355453
J Mol Biol. 2017 Sep 1;429(18):2825-2839
pubmed: 28736175
Nat Struct Mol Biol. 2016 Jun;23(6):513-521
pubmed: 27111888
J Cell Biol. 1981 Sep;90(3):656-64
pubmed: 7287819
Emerg Infect Dis. 2002 Jul;8(7):717-21
pubmed: 12095441
Cell Host Microbe. 2015 Dec 9;18(6):705-13
pubmed: 26651946
Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):7031-7036
pubmed: 28630325
J Virol. 2007 Nov;81(22):12696-703
pubmed: 17804508
Virol J. 2018 Aug 31;15(1):135
pubmed: 30165875
Nat Commun. 2018 May 14;9(1):1884
pubmed: 29760382
Virology. 2007 Oct 25;367(2):235-43
pubmed: 17624390
PLoS Negl Trop Dis. 2020 Sep 25;14(9):e0008555
pubmed: 32976538
PLoS Pathog. 2018 Aug 3;14(8):e1007190
pubmed: 30075025
J Virol. 2018 Dec 10;93(1):
pubmed: 30305351
Arch Virol. 2015 Jul;160(7):1851-74
pubmed: 25935216
Virus Evol. 2020 Feb 12;6(1):veaa003
pubmed: 32064119
Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):19967-72
pubmed: 22123988
Curr Opin Virol. 2019 Feb;34:90-96
pubmed: 30703578
Virology. 2002 Dec 20;304(2):274-81
pubmed: 12504568
mBio. 2018 Jan 2;9(1):
pubmed: 29295909
Am J Respir Cell Mol Biol. 2016 Jul;55(1):5-11
pubmed: 26982577
J Virol. 2009 Jan;83(1):440-53
pubmed: 18971266
Virology. 2008 Feb 20;371(2):439-46
pubmed: 17997467
J Mol Biol. 2007 Sep 21;372(3):774-97
pubmed: 17681537
Curr Opin Virol. 2011 Oct;1(4):289-97
pubmed: 22440785
Genome Biol. 2014 Mar 03;15(3):R46
pubmed: 24580807
PLoS Biol. 2013;11(5):e1001571
pubmed: 23723737
J Virol. 2017 Sep 27;91(20):
pubmed: 28794024
J Virol. 2008 Jan;82(2):938-48
pubmed: 18003730
J Virol. 2019 Mar 5;93(6):
pubmed: 30626681
Virus Res. 2013 Dec 26;178(2):486-94
pubmed: 24161346
Science. 2013 Apr 26;340(6131):479-83
pubmed: 23519211
Science. 2014 Jun 27;344(6191):1506-10
pubmed: 24970085
J Virol. 2011 Dec;85(24):13457-62
pubmed: 21976641
PLoS Pathog. 2016 Feb 05;12(2):e1005418
pubmed: 26849049
Science. 2017 Jun 2;356(6341):923-928
pubmed: 28572385
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Nat Methods. 2014 Aug;11(8):783-784
pubmed: 25075903
Am J Trop Med Hyg. 1970 May;19(3):520-6
pubmed: 5446318
J Virol. 1996 Aug;70(8):5282-7
pubmed: 8764038
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32
pubmed: 15572765
Transbound Emerg Dis. 2018 Dec;65(6):1733-1739
pubmed: 29992783
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Curr Top Microbiol Immunol. 2002;262:65-74
pubmed: 11987808
Int J Infect Dis. 2019 Oct;87:15-20
pubmed: 31357056
J Virol. 2009 Apr;83(7):3228-37
pubmed: 19153226
Nat Med. 1997 Aug;3(8):866-71
pubmed: 9256277
Annu Rev Virol. 2017 Sep 29;4(1):141-158
pubmed: 28645238
J Gen Virol. 2007 Aug;88(Pt 8):2320-2328
pubmed: 17622638
Curr Opin Microbiol. 2011 Aug;14(4):476-82
pubmed: 21807555
Viruses. 2020 Aug 06;12(8):
pubmed: 32781509
Curr Top Microbiol Immunol. 2016;392:231-76
pubmed: 26472215
Elife. 2015 Jan 29;4:
pubmed: 25633976
J Virol. 2015 Jul;89(14):7079-88
pubmed: 25926656
Am J Trop Med Hyg. 1996 Dec;55(6):661-6
pubmed: 9025695
Curr Opin Microbiol. 2008 Aug;11(4):362-8
pubmed: 18602020
Genome Res. 2012 Mar;22(3):568-76
pubmed: 22300766
Bioinformatics. 2011 Mar 15;27(6):863-4
pubmed: 21278185
Presse Med. 1986 Dec 20;15(45):2239-42
pubmed: 2949253
Virology. 1983 Sep;129(2):474-8
pubmed: 6312683
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
PLoS Negl Trop Dis. 2012;6(5):e1659
pubmed: 22629479
Cell Host Microbe. 2017 Nov 8;22(5):688-696.e5
pubmed: 29120745
Infect Genet Evol. 2009 Jul;9(4):417-29
pubmed: 19460307
PLoS One. 2011;6(7):e21398
pubmed: 21750710
PLoS Pathog. 2009 Apr;5(4):e1000358
pubmed: 19343214
J Med Virol. 2004 Mar;72(3):424-35
pubmed: 14748066
Arch Pathol Lab Med. 2017 Jun;141(6):776-786
pubmed: 28169558
J Virol. 2017 Dec 14;92(1):
pubmed: 29070682
Life Sci Alliance. 2019 Dec 20;3(1):
pubmed: 31862858
J Virol. 2015 Nov 18;90(3):1414-23
pubmed: 26581979
Front Microbiol. 2018 Apr 23;9:749
pubmed: 29740407
J Virol. 2013 Dec;87(23):13070-5
pubmed: 24049182
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W320-4
pubmed: 24753421
J Med Virol. 1984;14(4):295-303
pubmed: 6512508