Deep learning-based classification of retinal atrophy using fundus autofluorescence imaging.

Convolutional neural network Deep learning Geographic atrophy Inherited retinal disease Retinal imaging

Journal

Computers in biology and medicine
ISSN: 1879-0534
Titre abrégé: Comput Biol Med
Pays: United States
ID NLM: 1250250

Informations de publication

Date de publication:
03 2021
Historique:
received: 14 09 2020
revised: 14 12 2020
accepted: 19 12 2020
pubmed: 1 1 2021
medline: 3 7 2021
entrez: 31 12 2020
Statut: ppublish

Résumé

To automatically classify retinal atrophy according to its etiology, using fundus autofluorescence (FAF) images, using a deep learning model. In this study, FAF images of patients with advanced dry age-related macular degeneration (AMD), also called geographic atrophy (GA), and genetically confirmed inherited retinal diseases (IRDs) in late atrophic stages [Stargardt disease (STGD1) and Pseudo-Stargardt Pattern Dystrophy (PSPD)] were included. The FAF images were used to train a multi-layer deep convolutional neural network (CNN) to differentiate on FAF between atrophy in the context of AMD (GA) and atrophy secondary to IRDs. Three-hundred fourteen FAF images were included, of which 110 images were of GA eyes and 204 were eyes with genetically confirmed STGD1 or PSPD. In the first approach, the CNN was trained and validated with 251 FAF images. Established augmentation techniques were used and an Adam optimizer was used for training. For the subsequent testing, the built classifiers were then tested with 63 untrained FAF images. The visualization method was integrated gradient visualization. In the second approach, 10-fold cross-validation was used to determine the model's performance. In the first approach, the best performance of the model was obtained using 10 epochs, with an accuracy of 0.92 and an area under the curve for Receiver Operating Characteristic (AUC-ROC) of 0.981. Mean accuracy was 87.30 ± 2.96. In the second approach, a mean accuracy of 0.79 ± 0.06 was obtained. This study describes the use of a deep learning-based algorithm to automatically classify atrophy on FAF imaging according to its etiology. Accurate differential diagnosis between GA and late-onset IRDs masquerading as GA on FAF can be performed with good accuracy and AUC-ROC values.

Identifiants

pubmed: 33383315
pii: S0010-4825(20)30529-1
doi: 10.1016/j.compbiomed.2020.104198
pii:
doi:

Banques de données

ClinicalTrials.gov
['NCT02087085', 'NCT02247479']

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

104198

Informations de copyright

Copyright © 2020 Elsevier Ltd. All rights reserved.

Auteurs

Alexandra Miere (A)

Department of Ophthalmology, Centre Hospitalier Intercommunal de Créteil, Créteil, France; Laboratory of Images, Signals and Intelligent Systems (LISSI), (EA N° 3956), University Paris-Est, Créteil, France. Electronic address: alexandra.miere@chicreteil.fr.

Vittorio Capuano (V)

Department of Ophthalmology, Centre Hospitalier Intercommunal de Créteil, Créteil, France.

Arthur Kessler (A)

EPISEN - ISBS, University Paris-Est, Créteil, France.

Olivia Zambrowski (O)

Department of Ophthalmology, Centre Hospitalier Intercommunal de Créteil, Créteil, France.

Camille Jung (C)

Clinical Research Center, Centre Hospitalier Intercommunal de Créteil, Créteil, France.

Donato Colantuono (D)

Department of Ophthalmology, Centre Hospitalier Intercommunal de Créteil, Créteil, France.

Carlotta Pallone (C)

Department of Ophthalmology, Centre Hospitalier Intercommunal de Créteil, Créteil, France.

Oudy Semoun (O)

Department of Ophthalmology, Centre Hospitalier Intercommunal de Créteil, Créteil, France.

Eric Petit (E)

Laboratory of Images, Signals and Intelligent Systems (LISSI), (EA N° 3956), University Paris-Est, Créteil, France.

Eric Souied (E)

Department of Ophthalmology, Centre Hospitalier Intercommunal de Créteil, Créteil, France.

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